RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZBTB20Q9HC78 741 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 DCAF13Q9NV06 445 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 DSPPQ9NZW4 1301 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 OR6C70A6NIJ9 312 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 NPIPB9F8W1W9 429 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 KIAA0513O60268 411 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 SERPINB7O75635 380 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 PPM1BO75688 479 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 DNAJB5O75953 348 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 IFNA14P01570 189 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 FBXO45P0C2W1 286 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 KRT20P35900 424 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 ELOAQ14241 798 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 FLOT2Q14254 428 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 FLYWCH1Q4VC44 716 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 ACER2Q5QJU3 275 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 CBLL1Q75N03 491 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 NUP54Q7Z3B4 507 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 KRT73Q86Y46 540 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 APLFQ8IW19 511 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 TAMM41Q96BW9 452 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 LRGUKQ96M69 825 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 COL21A1Q96P44 957 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 SPATA5L1Q9BVQ7 753 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 RSPO3Q9BXY4 272 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 HOXD1Q9GZZ0 328 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 DENND2DQ9H6A0 471 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 OLAHQ9NV23 265 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 STMN3Q9NZ72 180 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 KCNE5Q9UJ90 142 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 PCDHGA10Q9Y5H3 936 aa15.04■□□□□ -0
CDK5RAP3-228ENST00000583363 NPIPA5A0A0B4J1W7 369 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 TCRBV5S2A0A599 114 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 AGAP5A6NIR3 686 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 AQP12BA6NM10 295 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 TMEM229AB2RXF0 380 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 NPIPA7E9PJI5 369 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 ABCB7O75027 752 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 UGT2B11O75310 529 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 UGT2B17O75795 530 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 SERPINA1P01009 418 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 ALPPP05187 535 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 NPIPA8P0DM63 369 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 CYP4B1P13584 511 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 RPS4Y1P22090 263 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 IL12BP29460 328 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 SSR4P51571 173 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 CCL11P51671 97 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 ATP12AP54707 1039 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 ACTR3P61158 418 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 DMTNQ08495 405 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 EFR3AQ14156 821 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 KPNB1Q14974 876 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 ZNF141Q15928 474 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 MAPK14Q16539 360 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 ZNF791Q3KP31 576 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 LRRC23Q53EV4 343 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 CYBRD1Q53TN4 286 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 MTX3Q5HYI7 312 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 DESI1Q6ICB0 168 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 OPN5Q6U736 354 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 EIF3MQ7L2H7 374 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 AQP12AQ8IXF9 295 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 EID3Q8N140 333 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 BHLHE22Q8NFJ8 381 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 OR4C3Q8NH37 302 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 OR52P1PQ8NH57 321 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 SPPL2AQ8TCT8 520 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 HGDQ93099 445 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 TRIM15Q9C019 465 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 QRSL1Q9H0R6 528 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 TEKT2Q9UIF3 430 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 KCNMB2Q9Y691 235 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 HECTD1Q9ULT8 2610 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 NAV2Q8IVL1 2488 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 BOD1L1Q8NFC6 3051 aa15.03■□□□□ -0
CDK5RAP3-228ENST00000583363 A6NL46 340 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 CDK2AP1O14519 115 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 OR6B1O95007 311 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 UTS2O95399 124 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 DBIP07108 87 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 PABPC4LP0CB38 370 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 TBXA2RP21731 343 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 DCTP40126 519 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 SOX3P41225 446 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 FBXW4P57775 412 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 SELENOWP63302 87 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 KCNC4Q03721 635 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 CCNIQ14094 377 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 NTRK2Q16620 822 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 GRAMD1BQ3KR37 738 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 IRAK1BP1Q5VVH5 260 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 HMGN2P46Q86SG4 172 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 ARMC8Q8IUR7 673 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 PEX5LQ8IYB4 626 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 DND1Q8IYX4 353 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 SLC26A7Q8TE54 656 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 ASB15Q8WXK1 588 aa15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 SPACA9Q96E40 222 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-228ENST00000583363 RNF145Q96MT1 663 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms