RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 AGR2O95994 175 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 AK1P00568 194 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 TPOP07202 933 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 GP1BBP13224 206 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 GABRA1P14867 456 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 CHMP24386 653 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 MSX1P28360 303 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 PTGER4P35408 488 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 ADH7P40394 386 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 CLK3P49761 638 aaKnown RBP11.48□□□□□ -0.57
SNORD55-201ENST00000581525 AQP5P55064 265 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 B3GALT5-AS1P59052 145 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 TP53BP2Q13625 1128 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 GANABQ14697 944 aaKnown RBP11.48□□□□□ -0.57
SNORD55-201ENST00000581525 BCL2A1Q16548 175 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 TMEM44Q2T9K0 475 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 ARHGAP11BQ3KRB8 267 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 KLHL26Q53HC5 615 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 EIPR1Q53HC9 387 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 DCST2Q5T1A1 773 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 WLSQ5T9L3 541 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 ADGRE4PQ86SQ3 457 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 MARCH3Q86UD3 253 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 FUNDC1Q8IVP5 155 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 COX18Q8N8Q8 333 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 OR4A15Q8NGL6 344 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 DUSP19Q8WTR2 217 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 CDS1Q92903 461 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 WDYHV1Q96HA8 205 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 OR52E6Q96RD3 313 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 UCN2Q96RP3 112 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 SIKE1Q9BRV8 207 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 YIPF4Q9BSR8 244 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 PNPLA3Q9NST1 481 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 FBXL2Q9UKC9 423 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 FAF1Q9UNN5 650 aaPredicted RBP11.48□□□□□ -0.57
SNORD55-201ENST00000581525 FAM215AQ9Y5M1 114 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
SNORD55-201ENST00000581525 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 NBPF19A0A087WUL8 3843 aa11.48□□□□□ -0.57
SNORD55-201ENST00000581525 DIDO1Q9BTC0 2240 aaKnown RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 UQCRHLA0A096LP55 91 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 RNF103-CHMP3A0A140T963 221 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 CCDC154A6NI56 674 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 FIGNL2A6NMB9 653 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 LINC01387J3KSC0 135 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 POLR3GO15318 223 aaPredicted RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 TRAPPC6AO75865 159 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 CPSF4O95639 269 aaKnown RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ANGPTL1O95841 491 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 HOXB9P17482 250 aaPredicted RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 BMP7P18075 431 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ACVR2AP27037 513 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 TRPC1P48995 793 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 POLR2JP52435 117 aaKnown RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 SMSP52788 366 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 MVDP53602 400 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ATP12AP54707 1039 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 WIPI1Q5MNZ9 446 aaPredicted RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 METTL21CQ5VZV1 264 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 FIGNL1Q6PIW4 674 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 BLOC1S3Q6QNY0 202 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 MAMDC2Q7Z304 686 aaPredicted RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 MTERF4Q7Z6M4 381 aaKnown RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ANKRD46Q86W74 232 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 MISPQ8IVT2 679 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ULK2Q8IYT8 1036 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 MIER2Q8N344 545 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ARFGAP2Q8N6H7 521 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 OR5AK3PQ8NH89 298 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ZPLD1Q8TCW7 415 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ABTB1Q969K4 478 aaPredicted RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ZBTB18Q99592 522 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 UGT2B28Q9BY64 529 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 NMUR2Q9GZQ4 415 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ZNF385DQ9H6B1 395 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 POLE3Q9NRF9 147 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 PLEKHB1Q9UF11 243 aaPredicted RBP11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ACAD8Q9UKU7 415 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 ICE1Q9Y2F5 2266 aa11.47□□□□□ -0.57
SNORD55-201ENST00000581525 SPTBN1Q01082 2364 aaKnown RBP11.46□□□□□ -0.57
SNORD55-201ENST00000581525 PRAMEF27A3QJZ7 478 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 C17orf51A8MQB3 221 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 DNAJA2O60884 412 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 EPPINO95925 133 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 ESRRAP11474 423 aaPredicted RBP11.46□□□□□ -0.57
SNORD55-201ENST00000581525 DPP4P27487 766 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 CDKN2CP42773 168 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 NME5P56597 212 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 RCAN2Q14206 197 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 ZNF141Q15928 474 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 SZRD1Q7Z422 152 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 MRGPRGQ86SM5 289 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 YRDCQ86U90 279 aaKnown RBP11.46□□□□□ -0.57
SNORD55-201ENST00000581525 PM20D2Q8IYS1 436 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 TRIML2Q8N7C3 387 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 ACBD4Q8NC06 268 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 OR5D16Q8NGK9 328 aa11.46□□□□□ -0.57
SNORD55-201ENST00000581525 FBXO30Q8TB52 745 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms