RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 NOX3Q9HBY0 568 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 C19orf12Q9NSK7 152 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 OR5K4A6NMS3 321 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 ARNTLO00327 626 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 CASC3O15234 703 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 SPINT3P49223 89 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 AKR1C2P52895 323 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 GPR139Q6DWJ6 353 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 TMEM163Q8TC26 289 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 CD200R1Q8TD46 325 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 SPIN2AQ99865 258 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 SPIN2BQ9BPZ2 258 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 INPP5EQ9NRR6 644 aa13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 MYEF2Q9P2K5 600 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-217ENST00000581241 FOSL1P15407 271 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 HMGCLP35914 325 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 MAGEA6P43360 314 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 IDH3GP51553 393 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 MLLT11Q13015 90 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 OR56B2PQ8NGI1 322 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 FTCDNL1E5RQL4 147 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 CA12O43570 354 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 HTR3BO95264 441 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 BATFQ16520 125 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 ZNF704Q6ZNC4 412 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 LRRC28Q86X40 367 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 UEVLDQ8IX04 471 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 SLC25A18Q9H1K4 315 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 GGT3PA6NGU5 568 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 TRIM64BA6NI03 449 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 B4GAT1O43505 415 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 RAB6AP20340 208 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 MLC1Q15049 377 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 GGHQ92820 318 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 DMRT3Q9NQL9 472 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 ZNF225Q9UK10 706 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 BCL7AQ4VC05 210 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 ZNF551Q7Z340 670 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 DEFB119Q8N690 84 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 WDSUB1Q8N9V3 476 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 IL17RDQ8NFM7 739 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 GPR148Q8TDV2 347 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 UTP4Q969X6 686 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 PRRC1Q96M27 445 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 ATG4BQ9Y4P1 393 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 TEX51A0A1B0GUA7 166 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 TSTD3H0UI37 97 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 STC2O76061 302 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 APBB3O95704 486 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 RPS17P08708 135 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 SUOXP51687 545 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 OR4N5Q8IXE1 308 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 GPR137CQ8N3F9 429 aa13.74□□□□□ -0.21
CSNK1D-217ENST00000581241 NUP188Q5SRE5 1749 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 A0A1W2PQ09 198 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 A8MXE2 369 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 IL1AP01583 271 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 DDCP20711 480 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 EPHA1P21709 976 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 TNFSF8P32971 234 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 POLR2HP52434 150 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 WDR5P61964 334 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 PSPHP78330 225 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 RPP30P78346 268 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 ACSM3Q53FZ2 586 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 PM20D1Q6GTS8 502 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 LARP4Q71RC2 724 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 MFSD6LQ8IWD5 586 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 SIMC1Q8NDZ2 872 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 STEAP2Q8NFT2 490 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 ZMYND19Q96E35 227 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 ZNF142P52746 1687 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 ANKRD33BA6NCL7 494 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 OIP5O43482 229 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 KLF8O95600 359 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 MT-CO2P00403 227 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 CLDN10P78369 228 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 JAG1P78504 1218 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 SOX4Q06945 474 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 TBCEQ15813 527 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 ZNF679Q8IYX0 411 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 DNAAF1Q8NEP3 725 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 ST6GALNAC5Q9BVH7 336 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 RLIMQ9NVW2 624 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 EMCNQ9ULC0 261 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 TMEM225BP0DP42 221 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 GIFP27352 417 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 CRABP1P29762 137 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 FXYD4P59646 89 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 FAM189BP81408 668 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 PIP5KL1Q5T9C9 394 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 RAET1LQ5VY80 246 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 MR1Q95460 341 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 BORCS7Q96B45 105 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 GPR45Q9Y5Y3 372 aa13.73□□□□□ -0.21
CSNK1D-217ENST00000581241 KIAA0355O15063 1070 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms