RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 TUBB4AP04350 444 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 IL3P08700 152 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 SNRPAP09012 282 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 EFNA1P20827 205 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 S1PR1P21453 382 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZNF10P21506 573 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 NT5EP21589 574 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 CNTFP26441 200 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 GSTM2P28161 218 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 TNFRSF8P28908 595 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 HSD17B3P37058 310 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ALDH9A1P49189 494 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 SERPINB9P50453 376 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 SLC37A1P57057 533 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 AP2B1P63010 937 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 MRPS35P82673 323 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 MXRA7P84157 204 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 PLIN5Q00G26 463 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 RBPJQ06330 500 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 MGAT2Q10469 447 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 TBL3Q12788 808 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 SLC29A2Q14542 456 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ACAP2Q15057 778 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 EBPQ15125 230 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZNF630Q2M218 657 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZNF791Q3KP31 576 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 PIGGQ5H8A4 983 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZNF678Q5SXM1 525 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 CCNYL2Q5T2Q4 361 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 LIPJQ5W064 366 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FRG2Q64ET8 278 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 TTC19Q6DKK2 380 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 RTL6Q6ICC9 239 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 RTL4Q6ZR62 310 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FAM47EQ6ZV65 393 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 TRILQ7L0X0 811 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 COMMD6Q7Z4G1 85 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 WDR53Q7Z5U6 358 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 NUDT13Q86X67 352 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 LIX1LQ8IVB5 337 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 C4orf33Q8N1A6 199 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 GHDCQ8N2G8 530 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 METTL4Q8N3J2 472 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZCCHC7Q8N3Z6 543 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 CCNYL1Q8N7R7 359 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZNF615Q8N8J6 731 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZNF441Q8N8Z8 693 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ZFP62Q8NB50 900 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 MORN4Q8NDC4 146 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 C16orf52Q8NHV5 167 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FAM57AQ8TBR7 257 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 SELENOMQ8WWX9 145 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 NRGNQ92686 78 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 HOXB13Q92826 284 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 KAT2AQ92830 837 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 RIT1Q92963 219 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 UBE2E3Q969T4 207 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 TM4SF18Q96CE8 201 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 KLHL29Q96CT2 875 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 CNRIP1Q96F85 164 aaPredicted RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 APIPQ96GX9 242 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FBXL20Q96IG2 436 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FRG2BQ96QU4 278 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 NODALQ96S42 347 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 MRPL57Q9BQC6 102 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 MRI1Q9BV20 369 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ITPAQ9BY32 194 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ACPTQ9BZG2 426 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 WWTR1Q9GZV5 400 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 NXF5Q9H1B4 397 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 KLK15Q9H2R5 256 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 MRPL46Q9H2W6 279 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 GSTO2Q9H4Y5 243 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 DDX31Q9H8H2 851 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 CXorf21Q9HAI6 301 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 BCO1Q9HAY6 547 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 CLK4Q9HAZ1 481 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 SH2D2AQ9NP31 389 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 ALKBH4Q9NXW9 302 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FLRT3Q9NZU0 649 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 GIMAP2Q9UG22 337 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 SCOCQ9UIL1 159 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 PHF11Q9UIL8 331 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 CES1P1Q9UKY3 287 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 RNF6Q9Y252 685 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 YARS2Q9Y2Z4 477 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 SLC6A5Q9Y345 797 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FIS1Q9Y3D6 152 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 FAM215AQ9Y5M1 114 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 NOX1Q9Y5S8 564 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 IKBKGQ9Y6K9 419 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.63□□□□□ -1.83
DDX42-211ENST00000580108 MPDZO75970 2070 aa3.63□□□□□ -1.83
DDX42-211ENST00000580108 SPG11Q96JI7 2443 aa3.62□□□□□ -1.83
DDX42-211ENST00000580108 HIVEP1P15822 2718 aa3.62□□□□□ -1.83
DDX42-211ENST00000580108 IQANK1A0A1B0GTG1 560 aa3.62□□□□□ -1.83
DDX42-211ENST00000580108 DNAJC9-AS1A6NH13 148 aa3.62□□□□□ -1.83
DDX42-211ENST00000580108 TMEM233B4DJY2 109 aa3.62□□□□□ -1.83
DDX42-211ENST00000580108 G3V2L1 256 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms