RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ALKBH4Q9NXW9 302 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ZIM2Q9NZV7 527 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 SLC6A5Q9Y345 797 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 GPR45Q9Y5Y3 372 aa12.09□□□□□ -0.47
RPAIN-216ENST00000575599 ASH1LQ9NR48 2969 aaKnown RBP12.09□□□□□ -0.47
RPAIN-216ENST00000575599 C17orf51A8MQB3 221 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 ADAM10O14672 748 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 ANKRD28O15084 1053 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 UTS2O95399 124 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 IGKV1D-16P01601 117 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 HPNP05981 417 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 WNT3P56703 355 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 UFM1P61960 85 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 GXYLT1Q4G148 440 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 EIPR1Q53HC9 387 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 EMC4Q5J8M3 183 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 SPANXN4Q5MJ08 99 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 WIPI1Q5MNZ9 446 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-216ENST00000575599 WLSQ5T9L3 541 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 FIGNL1Q6PIW4 674 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 RPTNQ6XPR3 784 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 YRDCQ86U90 279 aaKnown RBP12.08□□□□□ -0.48
RPAIN-216ENST00000575599 PLCZ1Q86YW0 608 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 CLEC4FQ8N1N0 589 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 RPRMLQ8N4K4 120 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 GLB1L3Q8NCI6 653 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-216ENST00000575599 FAM83FQ8NEG4 500 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-216ENST00000575599 OR8J2Q8NGG1 315 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 OR4A15Q8NGL6 344 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 PSMA8Q8TAA3 256 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 SFXN5Q8TD22 340 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 HOXB13Q92826 284 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-216ENST00000575599 TESCQ96BS2 214 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 NTNG2Q96CW9 530 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 DMRTA2Q96SC8 542 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 CCDC106Q9BWC9 280 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 SDR39U1Q9NRG7 319 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-216ENST00000575599 CCDC167Q9P0B6 97 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 PPP4R1LQ9P1A2 415 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 FBXL2Q9UKC9 423 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 FAF1Q9UNN5 650 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-216ENST00000575599 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.48
RPAIN-216ENST00000575599 FIGNL2A6NMB9 653 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 NR5A2O00482 541 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 RNASET2O00584 256 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 KCNK2O95069 426 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 CPSF4O95639 269 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 FREM3P0C091 2139 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 TCEA1P23193 301 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 MAP3K8P41279 467 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 CLK3P49761 638 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 MNAT1P51948 309 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 SMSP52788 366 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 MXRA7P84157 204 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 CYLC2Q14093 348 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 KRT72Q14CN4 511 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ZSCAN26Q16670 478 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 DPY19L1Q2PZI1 675 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 GRAMD1BQ3KR37 738 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 FAM174BQ3ZCQ3 159 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 MMEL1Q495T6 779 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 CCNJQ5T5M9 372 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ANXA8L1Q5VT79 327 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 FAM91A1Q658Y4 838 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ZCCHC12Q6PEW1 402 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ZNF771Q7L3S4 317 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 MARVELD2Q8N4S9 558 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ZNF808Q8N4W9 903 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 OR4K17Q8NGC6 315 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 OR14L1PQ8NHC6 308 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 PHF10Q8WUB8 498 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 CDS1Q92903 461 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 MOAP1Q96BY2 351 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 NSL1Q96IY1 281 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 TEX37Q96LM6 180 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ACTRT3Q9BYD9 372 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 TBL1XR1Q9BZK7 514 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ZNF385DQ9H6B1 395 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 GPATCH2Q9NW75 528 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 TMEM45AQ9NWC5 275 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 FAM120CQ9NX05 1096 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 TAGLN3Q9UI15 199 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 DKKL1Q9UK85 242 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 PCDHGB4Q9UN71 923 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 ABCG2Q9UNQ0 655 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 SPTBN1Q01082 2364 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 SPTAN1Q13813 2472 aaKnown RBP12.07□□□□□ -0.48
RPAIN-216ENST00000575599 DOPEY1Q5JWR5 2465 aa12.07□□□□□ -0.48
RPAIN-216ENST00000575599 RNF103-CHMP3A0A140T963 221 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 LOC100653049A0A140TA62 436 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 FAM234BA2RU67 622 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 CCDC154A6NI56 674 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 FADS1O60427 444 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 CBR3O75828 277 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 ATP5HO75947 161 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 KRT34O76011 436 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 SNRPB2P08579 225 aaKnown RBP12.06□□□□□ -0.48
RPAIN-216ENST00000575599 COX4I1P13073 169 aa12.06□□□□□ -0.48
RPAIN-216ENST00000575599 ACVR2AP27037 513 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms