RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 HYLS1Q96M11 299 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ARHGDIGQ99819 225 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 PCBD2Q9H0N5 130 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF624Q9P2J8 865 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-205ENST00000571272 CLEC4AQ9UMR7 237 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 ENTPD4Q9Y227 616 aa16.32■□□□□ 0.2
SCARF1-205ENST00000571272 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 RGS9O75916 674 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-205ENST00000571272 ZIC2O95409 532 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-205ENST00000571272 AIFM1O95831 613 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 RPN2P04844 631 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 SLC35G4P0C7Q5 338 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 CFL1P23528 166 aaKnown RBP16.31■□□□□ 0.2
SCARF1-205ENST00000571272 FPR3P25089 353 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 TALDO1P37837 337 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 BCL6P41182 706 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 STAT5AP42229 794 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 LTB4RQ15722 352 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 METRNLQ641Q3 311 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 ARL9Q6T311 187 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 CXXC5Q7LFL8 322 aaKnown RBP16.31■□□□□ 0.2
SCARF1-205ENST00000571272 GDF7Q7Z4P5 450 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 OR2T33Q8NG76 320 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 OR5M3Q8NGP4 307 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 MED28Q9H204 178 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 C6orf106Q9H6K1 298 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF222Q9UK12 451 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 RASD1Q9Y272 281 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 CHP2O43745 196 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 CLEC3AO75596 197 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 PAICSP22234 425 aaKnown RBP16.31■□□□□ 0.2
SCARF1-205ENST00000571272 CERS1P27544 350 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 PDX1P52945 283 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 RPA4Q13156 261 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 C6orf132Q5T0Z8 1188 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 TMEM64Q6YI46 380 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 GPR135Q8IZ08 494 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 GHDCQ8N2G8 530 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 TMEM99Q8N816 258 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 SLC41A3Q96GZ6 507 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 ALG8Q9BVK2 526 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 NUDT15Q9NV35 164 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 ASB4Q9Y574 426 aa16.31■□□□□ 0.2
SCARF1-205ENST00000571272 CDH23Q9H251 3354 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 SNRNP200O75643 2136 aaKnown RBP16.3■□□□□ 0.2
SCARF1-205ENST00000571272 SYT5O00445 386 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 HIST1H1TP22492 207 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-205ENST00000571272 PPM1AP35813 382 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 RNF144AP50876 292 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-205ENST00000571272 TRA2BP62995 288 aaKnown RBP16.3■□□□□ 0.2
SCARF1-205ENST00000571272 ACSM1Q08AH1 577 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 KLHL12Q53G59 568 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 BMPERQ8N8U9 685 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 OR56A1Q8NGH5 318 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 CXorf40AQ8TE69 158 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 CYSLTR2Q9NS75 346 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 BABAM2Q9NXR7 383 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 MAT2BQ9NZL9 334 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 MARK1Q9P0L2 795 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 TRPM6Q9BX84 2022 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 REM1O75628 298 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 ADH5P11766 374 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 NDUFV2P19404 249 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 SLC16A1P53985 500 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 ERVFC1P60507 584 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 PRR5P85299 388 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 PRDX1Q06830 199 aaKnown RBP16.3■□□□□ 0.2
SCARF1-205ENST00000571272 BICRALQ6AI39 1079 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 HBMQ6B0K9 141 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 ACBD7Q8N6N7 88 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 SMAP2Q8WU79 429 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-205ENST00000571272 C12orf66Q96MD2 445 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 ABHD1Q96SE0 405 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 HCAR1Q9BXC0 346 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 KCNN2Q9H2S1 579 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 UBQLN3Q9H347 655 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 NT5DC2Q9H857 520 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 KLHL28Q9NXS3 571 aa16.3■□□□□ 0.2
SCARF1-205ENST00000571272 A0A0C4DFX4 3053 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 E9PI62 339 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 SYPP08247 313 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 CSNK2A2P19784 350 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-205ENST00000571272 NTRK2Q16620 822 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 PLPP4Q5VZY2 271 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 LRRC28Q86X40 367 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-205ENST00000571272 CCDC28AQ8IWP9 274 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 OR10H4Q8NGA5 316 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 OR2A1Q8NGT9 310 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 MS4A6EQ96DS6 147 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 ENKD1Q9H0I2 346 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 KLHL1Q9NR64 748 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 SLC7A7Q9UM01 511 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 MGAT4AQ9UM21 535 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 SYNDIG1LA6NDD5 238 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 LEUTXA8MZ59 168 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 EMC8O43402 210 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 HSD17B2P37059 387 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 MTNR1BP49286 362 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms