RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 WHAMMP3Q1A5X7 153 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 TMEM44Q2T9K0 475 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 KRTAP24-1Q3LI83 254 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 GGTA1PQ4G0N0 100 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 FAM9CQ8IZT9 166 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 NOA1Q8NC60 698 aaKnown RBP13.25□□□□□ -0.29
USB1-214ENST00000568848 OR6K3Q8NGY3 331 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 CAVIN3Q969G5 261 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
USB1-214ENST00000568848 ZBED6CLQ96FA7 236 aaPredicted RBP13.25□□□□□ -0.29
USB1-214ENST00000568848 ADGRG7Q96K78 797 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 STMN4Q9H169 189 aaPredicted RBP13.25□□□□□ -0.29
USB1-214ENST00000568848 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 SLC35C2Q9NQQ7 365 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 PSME2Q9UL46 239 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 EMC9Q9Y3B6 208 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 TIMM22Q9Y584 194 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 A0A0J9YW62 118 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 STX16-NPEPL1H3BU86 382 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 STX16O14662 325 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 UTS2O95399 124 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 TP53P04637 393 aaPredicted RBP13.24□□□□□ -0.29
USB1-214ENST00000568848 AGTR1P30556 359 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 NCBP2P52298 156 aaKnown RBP eCLIP13.24□□□□□ -0.29
USB1-214ENST00000568848 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
USB1-214ENST00000568848 RPS3AP61247 264 aaKnown RBP13.24□□□□□ -0.29
USB1-214ENST00000568848 TAB1Q15750 504 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 PGGHGQ32M88 737 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 TEX35Q5T0J7 233 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 SEZ6L2Q6UXD5 910 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 MMGT1Q8N4V1 131 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 POC1BQ8TC44 478 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 ABHD3Q8WU67 409 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 SMAP2Q8WU79 429 aaPredicted RBP13.24□□□□□ -0.29
USB1-214ENST00000568848 SH3YL1Q96HL8 342 aaPredicted RBP13.24□□□□□ -0.29
USB1-214ENST00000568848 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 BBS4Q96RK4 519 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 SRXN1Q9BYN0 137 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 FBXO34Q9NWN3 711 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 NINJ2Q9NZG7 142 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 VPS29Q9UBQ0 182 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 MCM8Q9UJA3 840 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 RNF115Q9Y4L5 304 aa13.24□□□□□ -0.29
USB1-214ENST00000568848 IGHV3-15A0A0B4J1V0 119 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 UPK1AO00322 258 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 SSX4O60224 188 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 SMIM24O75264 130 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 GCM2O75603 506 aaPredicted RBP13.23□□□□□ -0.29
USB1-214ENST00000568848 CD8AP01732 235 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 C8BP07358 591 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 NAB1Q13506 487 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 UNC50Q53HI1 259 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 NCMAPQ5T1S8 102 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 ANKRD26P1Q6NSI1 321 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 PODNL1Q6PEZ8 512 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 FIGNL1Q6PIW4 674 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 TMEM151AQ8N4L1 468 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 ARIH2OSQ8N7S6 290 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
USB1-214ENST00000568848 GFM2Q969S9 779 aaKnown RBP13.23□□□□□ -0.29
USB1-214ENST00000568848 BRF2Q9HAW0 419 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 SNX6Q9UNH7 406 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 PLCE1Q9P212 2302 aa13.23□□□□□ -0.29
USB1-214ENST00000568848 YLPM1P49750 1951 aaKnown RBP13.22□□□□□ -0.29
USB1-214ENST00000568848 DPRXA6NFQ7 191 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 OIP5O43482 229 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 PLOD3O60568 738 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 IL33O95760 270 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 OTCP00480 354 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 COL6A2P12110 1019 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 TIA1P31483 386 aaKnown RBP eCLIP13.22□□□□□ -0.29
USB1-214ENST00000568848 GABRA3P34903 492 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 SFTPDP35247 375 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 IDUAP35475 653 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 HSD17B3P37058 310 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 MAGEA12P43365 314 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 FOXA1P55317 472 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 C21orf58P58505 322 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 BSPH1Q075Z2 132 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 C2orf80Q0P641 193 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 CSTF3Q12996 717 aaKnown RBP13.22□□□□□ -0.29
USB1-214ENST00000568848 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
USB1-214ENST00000568848 DNM1P46Q6ZS02 220 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 IFT81Q8WYA0 676 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 FBXW5Q969U6 566 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 ZNF524Q96C55 264 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 GMPPAQ96IJ6 420 aaPredicted RBP13.22□□□□□ -0.29
USB1-214ENST00000568848 TBL1XR1Q9BZK7 514 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 GLIPR2Q9H4G4 154 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 PTGES2Q9H7Z7 377 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 FAM120CQ9NX05 1096 aaKnown RBP13.22□□□□□ -0.29
USB1-214ENST00000568848 TAS2R9Q9NYW1 312 aa13.22□□□□□ -0.29
USB1-214ENST00000568848 POLR3HQ9Y535 204 aaPredicted RBP13.22□□□□□ -0.29
USB1-214ENST00000568848 A0A096LNT2 108 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 A0A1W2PP18 115 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms