RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ADH6P28332 368 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 MPIP34949 423 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 THBS2P35442 1172 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 PSMD4P55036 377 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 C17orf67Q0P5P2 114 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 TAB1Q15750 504 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 GTF2IRD2BQ6EKJ0 949 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 LETMD1Q6P1Q0 360 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 FIGNL1Q6PIW4 674 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 GALNT10Q86SR1 603 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 MARCH3Q86UD3 253 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 GTF2IRD2Q86UP8 949 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 GABRG1Q8N1C3 465 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 KBTBD8Q8NFY9 601 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 HSD17B8Q92506 261 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 ADGRG7Q96K78 797 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 KCNK17Q96T54 332 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 HBEGFQ99075 208 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 USB1Q9BQ65 265 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 TRAF4Q9BUZ4 470 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 TBL1XR1Q9BZK7 514 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 SHCBP1LQ9BZQ2 653 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 TRIM2Q9C040 744 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 DPH5Q9H2P9 285 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 SLC35C2Q9NQQ7 365 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 VPS29Q9UBQ0 182 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 MCM8Q9UJA3 840 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 GDF2Q9UK05 429 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 VDAC3Q9Y277 283 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 A0A087WV62 115 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 A0A096LNT2 108 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 GNG14A0A1W2PPG7 69 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 HMX2A2RU54 273 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 TNFSF11O14788 317 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 CXCL13O43927 109 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 SSX4O60224 188 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 GMFGO60234 142 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 GCM2O75603 506 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 SLITRK5O94991 958 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 IL33O95760 270 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 RBP1P09455 135 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 TYK2P29597 1187 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 SERPINB8P50452 374 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 NUDT6P53370 316 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 CASP9P55211 416 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 VLDLRP98155 873 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 BSPH1Q075Z2 132 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 HEPACAMQ14CZ8 416 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 MFSD12Q6NUT3 480 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 CLEC2AQ6UVW9 174 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 ESPNLQ6ZVH7 1005 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 ZNF619Q8N2I2 560 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 GTPBP8Q8N3Z3 284 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 OR2V1Q8NHB1 315 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 KISS1RQ969F8 398 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 TNFRSF13CQ96RJ3 184 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 ERP44Q9BS26 406 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 POTEKPQ9BYX7 375 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 Q9N2J8 555 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 FBXO34Q9NWN3 711 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 NFU1Q9UMS0 254 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 CADP27708 2225 aa10.51□□□□□ -0.73
GTF3C1-209ENST00000568569 A0A087WZY1 265 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 FAM234BA2RU67 622 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ZSCAN12O43309 604 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PCDH7O60245 1069 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 SMIM24O75264 130 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ANGPTL1O95841 491 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 CD8AP01732 235 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 RPS17P08708 135 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PABPC4LP0CB38 370 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PYGBP11216 843 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 HSD3B1P14060 373 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ME2P23368 584 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 HSD3B2P26439 372 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PAFAH1B1P43034 410 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 RFX3P48380 749 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 DSCR9P59020 149 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 RAC1P63000 192 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 MRPS25P82663 173 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PRR5P85299 388 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 LOXL1Q08397 574 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ZNHIT3Q15649 155 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 TSC22D1Q15714 1073 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 TMEM201Q5SNT2 666 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PDSS1Q5T2R2 415 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 SFRP5Q5T4F7 317 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 HBMQ6B0K9 141 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 TFAP2EQ6VUC0 442 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ATG4DQ86TL0 474 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 CCDC25Q86WR0 208 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PLD6Q8N2A8 252 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 OR10H5Q8NGA6 315 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 PIWIL2Q8TC59 973 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ZBTB8AQ96BR9 441 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 ADAD1Q96M93 576 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 BBS4Q96RK4 519 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 SHARPINQ9H0F6 387 aa10.5□□□□□ -0.73
GTF3C1-209ENST00000568569 VPS11Q9H270 941 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms