RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 DPH7Q9BTV6 452 aa4.11□□□□□ -1.75
LINC00557-201ENST00000563184 RWDD1Q9H446 243 aaPredicted RBP4.11□□□□□ -1.75
LINC00557-201ENST00000563184 RNF6Q9Y252 685 aa4.11□□□□□ -1.75
LINC00557-201ENST00000563184 VSIG4Q9Y279 399 aa4.11□□□□□ -1.75
LINC00557-201ENST00000563184 L3MBTL1Q9Y468 752 aa4.11□□□□□ -1.75
LINC00557-201ENST00000563184 MFHAS1Q9Y4C4 1052 aa4.11□□□□□ -1.75
LINC00557-201ENST00000563184 GMPPBQ9Y5P6 360 aa4.11□□□□□ -1.75
LINC00557-201ENST00000563184 ESYT2A0FGR8 921 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 SAGE2PA6NJ88 616 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 CLDN3O15551 220 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 EFNA2O43921 213 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 IFNB1P01574 187 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 MDH1P40925 334 aaKnown RBP4.1□□□□□ -1.75
LINC00557-201ENST00000563184 TRPC1P48995 793 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 LIM2P55344 173 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 POLR2FP61218 127 aaKnown RBP4.1□□□□□ -1.75
LINC00557-201ENST00000563184 SERTAD2Q14140 314 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 CHI3L2Q15782 390 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 KRT71Q3SY84 523 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 RNF212Q495C1 297 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 GLYR1Q49A26 553 aaPredicted RBP4.1□□□□□ -1.75
LINC00557-201ENST00000563184 ASPHD2Q6ICH7 369 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 LRRC8BQ6P9F7 803 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 LANCL3Q6ZV70 420 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 MCOLN2Q8IZK6 566 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 ZNF525Q8N782 197 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 CCDC110Q8TBZ0 833 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 ARNTL2Q8WYA1 636 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 SLITRK2Q9H156 845 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 POLR3FQ9H1D9 316 aaPredicted RBP4.1□□□□□ -1.75
LINC00557-201ENST00000563184 COQ10BQ9H8M1 238 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 DPM3Q9P2X0 92 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 TP53TG3Q9ULZ0 132 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 USP16Q9Y5T5 823 aa4.1□□□□□ -1.75
LINC00557-201ENST00000563184 FAM74A7A6NL05 159 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 SMPD2O60906 423 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 STX11O75558 287 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 MBD3O95983 291 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 KRT6BP04259 564 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 BCKDHAP12694 445 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 KRT6CP48668 564 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 RPL8P62917 257 aaKnown RBP4.09□□□□□ -1.75
LINC00557-201ENST00000563184 CD47Q08722 323 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 ZNF154Q13106 437 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 FAM74A3Q4VXF1 159 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 PRR30Q53SZ7 412 aaPredicted RBP4.09□□□□□ -1.75
LINC00557-201ENST00000563184 IFNEQ86WN2 208 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 GRAMD2AQ8IUY3 354 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 C11orf42Q8N5U0 333 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 CSNK1A1LQ8N752 337 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 OR9A4Q8NGU2 314 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 NANPQ8TBE9 248 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 M1APQ8TC57 530 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 FEM1AQ9BSK4 669 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 NFKBIZQ9BYH8 718 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 RHOJQ9H4E5 214 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 ZNF275Q9NSD4 429 aaPredicted RBP4.09□□□□□ -1.75
LINC00557-201ENST00000563184 CYTH4Q9UIA0 394 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 MOKQ9UQ07 419 aa4.09□□□□□ -1.75
LINC00557-201ENST00000563184 LRRK1Q38SD2 2015 aa4.09□□□□□ -1.76
LINC00557-201ENST00000563184 KLF18A0A0U1RQI7 1052 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 IGKV3-15P01624 115 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 H2AFXP16104 143 aaPredicted RBP4.08□□□□□ -1.76
LINC00557-201ENST00000563184 DLSTP36957 453 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 NOVA1P51513 510 aaKnown RBP4.08□□□□□ -1.76
LINC00557-201ENST00000563184 NAPAP54920 295 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 OSTNP61366 133 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 RND3P61587 244 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 TMEM41BQ5BJD5 291 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 DCST2Q5T1A1 773 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 PVRIGQ6DKI7 326 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 CENPUQ71F23 418 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 ANKRD37Q7Z713 158 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 ZNF573Q86YE8 665 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 ZBED8Q8IZ13 594 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 OR13F1Q8NGS4 319 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 TBC1D31Q96DN5 1066 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 TMEM80Q96HE8 168 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 TSSK1BQ9BXA7 367 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 DPH5Q9H2P9 285 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 PNO1Q9NRX1 252 aaKnown RBP4.08□□□□□ -1.76
LINC00557-201ENST00000563184 VNN3Q9NY84 501 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 RDH8Q9NYR8 311 aa4.08□□□□□ -1.76
LINC00557-201ENST00000563184 JAK2O60674 1132 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 TRIM3O75382 744 aaPredicted RBP4.07□□□□□ -1.76
LINC00557-201ENST00000563184 OPN1LWP04000 364 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 CD55P08174 381 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 KLK2P20151 261 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 KCNJ11Q14654 390 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 TEX44Q53QW1 395 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 CELF3Q5SZQ8 465 aaKnown RBP4.07□□□□□ -1.76
LINC00557-201ENST00000563184 AFTPHQ6ULP2 937 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 SERPINA9Q86WD7 417 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 ZNF677Q86XU0 584 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 ZNF584Q8IVC4 421 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 FADS6Q8N9I5 356 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 SERAC1Q96JX3 654 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 DHX33Q9H6R0 707 aaKnown RBP4.07□□□□□ -1.76
LINC00557-201ENST00000563184 WDR76Q9H967 626 aa4.07□□□□□ -1.76
LINC00557-201ENST00000563184 POLD4Q9HCU8 107 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms