RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 HSPB3Q12988 150 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 GLYR1Q49A26 553 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-202ENST00000562722 BEX5Q5H9J7 111 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 FAM71E1Q6IPT2 247 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 ZNF704Q6ZNC4 412 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-202ENST00000562722 TIFABQ6ZNK6 161 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 SZRD1Q7Z422 152 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 WFDC8Q8IUA0 241 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 MMGT1Q8N4V1 131 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 CEP112Q8N8E3 955 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 NOA1Q8NC60 698 aaKnown RBP11.66□□□□□ -0.54
SF3B3-202ENST00000562722 OR6K3Q8NGY3 331 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 GPR151Q8TDV0 419 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 TMEM171Q8WVE6 324 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 PIK3R3Q92569 461 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 SLC9A6Q92581 669 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 ELP4Q96EB1 424 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 L3HYPDHQ96EM0 354 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 C16orf45Q96MC5 204 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-202ENST00000562722 AMDHD1Q96NU7 426 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 LMF2Q9BU23 707 aaKnown RBP11.66□□□□□ -0.54
SF3B3-202ENST00000562722 MYNNQ9NPC7 610 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 FANCFQ9NPI8 374 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 SIRT5Q9NXA8 310 aa11.66□□□□□ -0.54
SF3B3-202ENST00000562722 MCTS1Q9ULC4 181 aaKnown RBP11.66□□□□□ -0.54
SF3B3-202ENST00000562722 GXYLT2A0PJZ3 443 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 INAFM1C9JVW0 142 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 NDUFB5O43674 189 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 PSMG1O95456 288 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 CNOT4O95628 575 aaKnown RBP11.65□□□□□ -0.54
SF3B3-202ENST00000562722 OPN1LWP04000 364 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 MYL2P10916 166 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 ECHS1P30084 290 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 SLC6A8P48029 635 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 ZNF41P51814 821 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-202ENST00000562722 PRKAG1P54619 331 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 FOXA1P55317 472 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 OCRLQ01968 901 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 GRAMD1BQ3KR37 738 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 VPS26BQ4G0F5 336 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 C22orf34Q6ZV56 151 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 GALNT10Q86SR1 603 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 GGNQ86UU5 652 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 STK32CQ86UX6 486 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 WDR75Q8IWA0 830 aaKnown RBP11.65□□□□□ -0.54
SF3B3-202ENST00000562722 GATSQ8NAP1 163 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 MNS1Q8NEH6 495 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 OR10D3Q8NH80 312 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 PPP1R14CQ8TAE6 165 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 C11orf24Q96F05 449 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-202ENST00000562722 GMPPAQ96IJ6 420 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-202ENST00000562722 MARK4Q96L34 752 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 GSX2Q9BZM3 304 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 GSTO2Q9H4Y5 243 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 CXorf56Q9H5V9 222 aa11.65□□□□□ -0.54
SF3B3-202ENST00000562722 RRAGDQ9NQL2 400 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-202ENST00000562722 A0A087WZY1 265 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 SERTM1A2A2V5 107 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 TTC36A6NLP5 189 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 KIAA1324LA8MWY0 1029 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-202ENST00000562722 UBFD1O14562 309 aaKnown RBP11.64□□□□□ -0.55
SF3B3-202ENST00000562722 PDPK1O15530 556 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 CXCL13O43927 109 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 IGKV1D-16P01601 117 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 THBDP07204 575 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 ABHD2P08910 425 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 PYGBP11216 843 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 PRPS2P11908 318 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 HPGDP15428 266 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 ZNF17P17021 662 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 ME2P23368 584 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 LOXP28300 417 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-202ENST00000562722 GCAP28676 217 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 NR1H2P55055 460 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 PRR5P85299 388 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 GUSBP1Q15486 140 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 CFAP157Q5JU67 520 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 ANKRD26P1Q6NSI1 321 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 NOXRED1Q6NXP6 359 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 APOOLQ6UXV4 268 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 IKBIPQ70UQ0 350 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 ZNF551Q7Z340 670 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-202ENST00000562722 EXOC3L1Q86VI1 746 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 FAM76AQ8TAV0 307 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 FBXO30Q8TB52 745 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 CCDC126Q96EE4 140 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 ACTR6Q9GZN1 396 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 IQCGQ9H095 443 aaKnown RBP11.64□□□□□ -0.55
SF3B3-202ENST00000562722 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 TMEM185BQ9H7F4 350 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 HHATLQ9HCP6 504 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 PLSCR4Q9NRQ2 329 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 PAQR5Q9NXK6 330 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-202ENST00000562722 TAS2R7Q9NYW3 318 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 TBK1Q9UHD2 729 aa11.64□□□□□ -0.55
SF3B3-202ENST00000562722 WBP11Q9Y2W2 641 aaKnown RBP11.64□□□□□ -0.55
SF3B3-202ENST00000562722 FN1P02751 2386 aaKnown RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 IGLV3-32A0A0A0MS00 114 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms