RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 GLRA3O75311 464 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 STK16O75716 305 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 TNFSF15O95150 251 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 MT-ND3P03897 115 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 RBP1P09455 135 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 DHRS4L1P0CG22 281 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SMIM10L1P0DMW3 83 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 CDH1P12830 882 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 NCF1P14598 390 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 CMPK1P30085 196 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 CSTF2P33240 577 aaKnown RBP eCLIP4.24□□□□□ -1.731e-7■■□□□ 12.1
SMG1-206ENST00000562668 RPA3P35244 121 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ERVPABLB-1P60509 514 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ARF3P61204 181 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 REEP5Q00765 189 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ACY1Q03154 408 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 IL11RAQ14626 422 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 IL13RA2Q14627 380 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PCLAFQ15004 111 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 AP5B1Q2VPB7 878 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 DEFB110Q30KQ9 67 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 UNC50Q53HI1 259 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ZNF678Q5SXM1 525 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 LGSNQ5TDP6 509 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SULT1C3Q6IMI6 304 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ADNP2Q6IQ32 1131 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 LCN10Q6JVE6 187 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 CAPN13Q6MZZ7 669 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 METTL2BQ6P1Q9 378 aaKnown RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 RPS27LQ71UM5 84 aaKnown RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 ZNF771Q7L3S4 317 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 LRRC70Q7Z2Q7 622 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ZFAND4Q86XD8 727 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PLD3Q8IV08 490 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 LSMEM2Q8N112 164 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 CNPY4Q8N129 248 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 TCAIMQ8N3R3 496 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 RAB42Q8N4Z0 105 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 CREB3L4Q8TEY5 395 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SLC5A11Q8WWX8 675 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ATL1Q8WXF7 558 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 EXT2Q93063 718 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 NXPE2Q96DL1 559 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 L3HYPDHQ96EM0 354 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PGM2Q96G03 612 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 MED8Q96G25 268 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 WBP1Q96G27 269 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SMIM10Q96HG1 83 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 APOPT1Q96IL0 206 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 C10orf90Q96M02 699 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 ZNF578Q96N58 590 aaPredicted RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 TSNARE1Q96NA8 513 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 LRFN5Q96NI6 719 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PRAP1Q96NZ9 151 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 TMEM237Q96Q45 408 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 OR6C1Q96RD1 312 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SH3GL2Q99962 352 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 MRPL57Q9BQC6 102 aaKnown RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 PCBD2Q9H0N5 130 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 EHD1Q9H4M9 534 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 NT5DC2Q9H857 520 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PELI2Q9HAT8 420 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 TMBIM4Q9HC24 238 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SDF2L1Q9HCN8 221 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PDE7BQ9NP56 450 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 MRPS30Q9NP92 439 aaKnown RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 G6PC2Q9NQR9 355 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 DNAJC11Q9NVH1 559 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SLC39A1Q9NY26 324 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 CPSF2Q9P2I0 782 aaKnown RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 SLC17A7Q9P2U7 560 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 DCDC2Q9UHG0 476 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PCTPQ9UKL6 214 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 SNX7Q9UNH6 387 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PLCL2Q9UPR0 1127 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 PLLPQ9Y342 182 aa4.24□□□□□ -1.73
SMG1-206ENST00000562668 MRPS2Q9Y399 296 aaKnown RBP4.24□□□□□ -1.73
SMG1-206ENST00000562668 A0A0J9YVX5 310 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 TRBC2A0A5B9 178 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 MAGEA13PA6NCF6 341 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 SYCE1LA8MT33 242 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 SUPT3HB4E1H0 165 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 TMEM150CB9EJG8 249 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 FAM157AC9JC47 383 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 NPIPB11E5RHQ5 1161 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 UBFD1O14562 309 aaKnown RBP4.23□□□□□ -1.73
SMG1-206ENST00000562668 POLR1CO15160 346 aaPredicted RBP4.23□□□□□ -1.73
SMG1-206ENST00000562668 ZNF749O43361 778 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 SRPX2O60687 465 aaPredicted RBP4.23□□□□□ -1.73
SMG1-206ENST00000562668 DNAJB6O75190 326 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 SPAG7O75391 227 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 ERLIN1O75477 346 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 SUPT3HO75486 399 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 SCRG1O75711 98 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 CCNDBP1O95273 360 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 C1GALT1C1LP0DN25 315 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 SPTBP11277 2137 aa4.23□□□□□ -1.73
SMG1-206ENST00000562668 EZRP15311 586 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms