RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PRR22Q8IZ63 422 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SUMF1Q8NBK3 374 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR51B5Q9H339 312 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 DUSP22Q9NRW4 184 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 TMEM181Q9P2C4 612 aa13.16□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC22A23A1A5C7 686 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 DCDC2BA2VCK2 349 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 EOMESO95936 686 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 INHAP05111 366 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 PLCXD3Q63HM9 321 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF317Q96PQ6 595 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 PBX4Q9BYU1 374 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 NUPL2O15504 423 aaKnown RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 HOXA11P31270 313 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 TRHRP34981 398 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM180BQ6P0A1 224 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 LACC1Q8IV20 430 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 CERS5Q8N5B7 392 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR4A16Q8NH70 328 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 RAB8BQ92930 207 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 FBRSL1Q9HCM7 1045 aaKnown RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 RPS15AP62244 130 aaKnown RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 VGLL4Q14135 290 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM69BQ5VUD6 431 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 ASPGQ86U10 573 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 LMF2Q9BU23 707 aaKnown RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 COPS3Q9UNS2 423 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 TCAPO15273 167 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 MC3RP41968 323 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 PREPP48147 710 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 TAS2R19P59542 299 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 C2orf27AQ580R0 203 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM162BQ5T6X4 162 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 TMEM107Q6UX40 140 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 LIPHQ8WWY8 451 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 THAP7Q9BT49 309 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 HIDE1A8MVS5 230 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 FOLR1P15328 257 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 KDELR2P33947 212 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 PIM3Q86V86 326 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 METTL27Q8N6F8 245 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 CDKN2AIPNLQ96HQ2 116 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 TRIB3Q96RU7 358 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 GALPQ9UBC7 116 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 STXBP5LQ9Y2K9 1186 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 ADAMTS13Q76LX8 1427 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 ALKQ9UM73 1620 aa13.15□□□□□ -0.3
CSPG4P12-202ENST00000559989 ACPPP15309 386 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 RFC3P40938 356 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 ELOCQ15369 112 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 PAGE3Q5JUK9 113 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 CTSL3PQ5NE16 218 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 NANOGP8Q6NSW7 305 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR5D16Q8NGK9 328 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 REEP6Q96HR9 211 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 ALG8Q9BVK2 526 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC2A11Q9BYW1 496 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 NANOGQ9H9S0 305 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 WASH6PQ9NQA3 447 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 SMOXQ9NWM0 555 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 OARD1Q9Y530 152 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF536O15090 1300 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR2M5A3KFT3 312 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 C2CD4BA6NLJ0 364 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 ALDOAP04075 364 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 FOXN2P32314 431 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 MBLAC2Q68D91 279 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 AGTRAPQ6RW13 159 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 IL20RBQ6UXL0 311 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 STEAP1Q9UHE8 339 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 J3KR12 359 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 SDC3O75056 442 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 PTBP3O95758 552 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TIMP2P16035 220 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TMEM31Q5JXX7 168 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 IL31RAQ8NI17 732 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 KIAA1191Q96A73 305 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 PTCHD1Q96NR3 888 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 SORCS2Q96PQ0 1159 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 HERPUD2Q9BSE4 406 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 CHRNA9Q9UGM1 479 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 MRPS14O60783 128 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TK1P04183 234 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TYRP1P17643 537 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZMAT1Q5H9K5 638 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms