RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ADAM29Q9UKF5 820 aa9.6□□□□□ -0.87
TRAF3-207ENST00000559734 SLC35F4A4IF30 521 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 E7ESA3 106 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 KCNAB3O43448 404 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 GCM2O75603 506 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-207ENST00000559734 SIX3O95343 332 aaPredicted RBP9.59□□□□□ -0.87
TRAF3-207ENST00000559734 ADAP00813 363 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 PGRP06401 933 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 MTHFD2P13995 350 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 CCNG1P51959 295 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAF3-207ENST00000559734 RAB35Q15286 201 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 TMEM201Q5SNT2 666 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 SFRP5Q5T4F7 317 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 FAM166AQ6J272 317 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 TFAP2EQ6VUC0 442 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 WDR75Q8IWA0 830 aaKnown RBP9.59□□□□□ -0.87
TRAF3-207ENST00000559734 METTL4Q8N3J2 472 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 L3MBTL4Q8NA19 623 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 OR2W6PQ8NHA6 318 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 OR2V1Q8NHB1 315 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 PIWIL2Q8TC59 973 aaKnown RBP9.59□□□□□ -0.87
TRAF3-207ENST00000559734 HSD17B8Q92506 261 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 SLC9A6Q92581 669 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 EXOSC8Q96B26 276 aaKnown RBP9.59□□□□□ -0.87
TRAF3-207ENST00000559734 C3orf49Q96BT1 292 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 TM4SF18Q96CE8 201 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 MTBPQ96DY7 904 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 ZNF681Q96N22 645 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 EML4Q9HC35 981 aaKnown RBP9.59□□□□□ -0.87
TRAF3-207ENST00000559734 SAYSD1Q9NPB0 183 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 GLRX2Q9NS18 164 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 POU2F3Q9UKI9 436 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 ABCG2Q9UNQ0 655 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 SNX24Q9Y343 169 aa9.59□□□□□ -0.87
TRAF3-207ENST00000559734 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.59□□□□□ -0.878e-8■■■■■ 31.6
TRAF3-207ENST00000559734 LOC100289279A0A1B0GTE1 492 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ELOA3DA6NLF2 546 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 SHISA9B4DS77 424 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 OR7A17O14581 309 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ABCD4O14678 606 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 FADS1O60427 444 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 USF1P22415 310 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 SPRP35270 261 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 GZMKP49863 264 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ALDH18A1P54886 795 aaKnown RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 PSPHP78330 225 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 GGTLC2Q14390 218 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ELOA3BQ3SY89 546 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 UBAP2Q5T6F2 1119 aaKnown RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 HBMQ6B0K9 141 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 GTF2IRD2BQ6EKJ0 949 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 DNAJC14Q6Y2X3 702 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 BHLHA15Q7RTS1 189 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 NUFIP2Q7Z417 695 aaKnown RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 GTF2IRD2Q86UP8 949 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 GABRG1Q8N1C3 465 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ELOA3Q8NG57 546 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ZNF675Q8TD23 568 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 PYROXD1Q8WU10 500 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ABHD3Q8WU67 409 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 C1orf159Q96HA4 380 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 REXO5Q96IC2 774 aaKnown RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 TBL1XR1Q9BZK7 514 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ELOVL6Q9H5J4 265 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 FARSBQ9NSD9 589 aaKnown RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 GIMAP4Q9NUV9 329 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 FAM120CQ9NX05 1096 aaKnown RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 PAQR5Q9NXK6 330 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-207ENST00000559734 ACOT9Q9Y305 439 aa9.58□□□□□ -0.88
TRAF3-207ENST00000559734 PRR14LQ5THK1 2151 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 FAM187AA6NFU0 413 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 TCF21O43680 179 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 LYZL6O75951 148 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 ANGPTL1O95841 491 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 CTAGE8P0CG41 777 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 COL6A2P12110 1019 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 CFPP27918 469 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 CRABP2P29373 138 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 MRPS25P82663 173 aaKnown RBP9.57□□□□□ -0.88
TRAF3-207ENST00000559734 PSG6Q00889 435 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 GALNT1Q10472 559 aaPredicted RBP9.57□□□□□ -0.88
TRAF3-207ENST00000559734 SQLEQ14534 574 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 ACAP2Q15057 778 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 PPA1Q15181 289 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 DECR1Q16698 335 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 GLYR1Q49A26 553 aaPredicted RBP9.57□□□□□ -0.88
TRAF3-207ENST00000559734 PDSS1Q5T2R2 415 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 FAM219BQ5XKK7 198 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 BHLHB9Q6PI77 547 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 CTAGE4Q8IX94 777 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 FAM9CQ8IZT9 166 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 FBXL14Q8N1E6 418 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 C1orf52Q8N6N3 182 aaKnown RBP9.57□□□□□ -0.88
TRAF3-207ENST00000559734 PPM1NQ8N819 430 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 GATSQ8NAP1 163 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 OR7G2Q8NG99 324 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 C10orf105Q8TEF2 133 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 TRPC4APQ8TEL6 797 aa9.57□□□□□ -0.88
TRAF3-207ENST00000559734 ADGRG7Q96K78 797 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms