RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SNRNP40Q96DI7 357 aaKnown RBP19.83■□□□□ 0.77
SNX1-206ENST00000559389 SAP130Q9H0E3 1048 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 NANOGQ9H9S0 305 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 EFCAB1Q9HAE3 211 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 UBQLN4Q9NRR5 601 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 ARL8BQ9NVJ2 186 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 TAGLN3Q9UI15 199 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 HRH3Q9Y5N1 445 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 ALG1L2C9J202 215 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 SNPHO15079 494 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 FCMRO60667 390 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 GLSO94925 669 aaPredicted RBP19.82■□□□□ 0.76
SNX1-206ENST00000559389 H6PDO95479 791 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 CRYABP02511 175 aaKnown RBP19.82■□□□□ 0.76
SNX1-206ENST00000559389 TFPTP0C1Z6 253 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 NR2F1P10589 423 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 ZNF24P17028 368 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 RFC3P40938 356 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 NUDT2P50583 147 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 KRT72Q14CN4 511 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 RABL3Q5HYI8 236 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 FNDC7Q5VTL7 733 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 C8orf82Q6P1X6 216 aaPredicted RBP19.82■□□□□ 0.76
SNX1-206ENST00000559389 APOOLQ6UXV4 268 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 LRRC74BQ6ZQY2 392 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 SLC38A5Q8WUX1 472 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 GPATCH1Q9BRR8 931 aaKnown RBP19.82■□□□□ 0.76
SNX1-206ENST00000559389 THUMPD3Q9BV44 507 aaKnown RBP19.82■□□□□ 0.76
SNX1-206ENST00000559389 TTTY12Q9BZ98 90 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 TBL1XR1Q9BZK7 514 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 RTN4RQ9BZR6 473 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 HOXD1Q9GZZ0 328 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 SLC38A1Q9H2H9 487 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 RUBCNLQ9H714 662 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 KAT8Q9H7Z6 458 aaKnown RBP19.82■□□□□ 0.76
SNX1-206ENST00000559389 FAM208BQ5VWN6 2430 aa19.82■□□□□ 0.76
SNX1-206ENST00000559389 DSPPQ9NZW4 1301 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 C15orf38-AP3S2A0A0A6YYH1 394 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 A0A1W2PQD3 144 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 SCDO00767 359 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 SLC28A2O43868 658 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 ARAFP10398 606 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 SLC6A2P23975 617 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 ELAVL4P26378 380 aaKnown RBP19.81■□□□□ 0.76
SNX1-206ENST00000559389 CPA2P48052 419 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 MASP1P48740 699 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 ATP12AP54707 1039 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 GPR68Q15743 365 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 HYAL4Q2M3T9 481 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 RNFT1Q5M7Z0 435 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 ZNF324BQ6AW86 544 aaPredicted RBP19.81■□□□□ 0.76
SNX1-206ENST00000559389 NET1Q7Z628 596 aaPredicted RBP19.81■□□□□ 0.76
SNX1-206ENST00000559389 ARPINQ7Z6K5 226 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 PACS2Q86VP3 889 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 ZNF619Q8N2I2 560 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 ZNF527Q8NB42 609 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 OIT3Q8WWZ8 545 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 MAL2Q969L2 176 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 TMEM19Q96HH6 336 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 BARD1Q99728 777 aaKnown RBP19.81■□□□□ 0.76
SNX1-206ENST00000559389 SH3GL1Q99961 368 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 TMEM38AQ9H6F2 299 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 ZNF703Q9H7S9 590 aaPredicted RBP19.81■□□□□ 0.76
SNX1-206ENST00000559389 ZFP64Q9NPA5 681 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 MKLN1Q9UL63 735 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 COL6A6A6NMZ7 2263 aa19.81■□□□□ 0.76
SNX1-206ENST00000559389 CENPVL1A0A0U1RR11 272 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 C2orf72A6NCS6 295 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 ACOT7O00154 380 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 CLK3P49761 638 aaKnown RBP19.8■□□□□ 0.76
SNX1-206ENST00000559389 CRISP3P54108 245 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 MLLT10P55197 1068 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 PLGLB1Q02325 96 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 CHRNEQ04844 493 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 GNA13Q14344 377 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 ZNF141Q15928 474 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 KLHL26Q53HC5 615 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 TIGD3Q6B0B8 471 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 SERPINA11Q86U17 422 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 MARCH3Q86UD3 253 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 NR4A3Q92570 626 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 JSRP1Q96MG2 331 aaPredicted RBP19.8■□□□□ 0.76
SNX1-206ENST00000559389 ASF1BQ9NVP2 202 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 CALML5Q9NZT1 146 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 KCNE5Q9UJ90 142 aa19.8■□□□□ 0.76
SNX1-206ENST00000559389 TMEM247A6NEH6 219 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 C17orf51A8MQB3 221 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 FAM166BA8MTA8 275 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 UGT2B17O75795 530 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 CBX6O95503 412 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 ANGPTL1O95841 491 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 HPGDP15428 266 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 ALDH6A1Q02252 535 aaKnown RBP19.79■□□□□ 0.76
SNX1-206ENST00000559389 ART3Q13508 389 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 CD226Q15762 336 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 ADRM1Q16186 407 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 CYP51A1Q16850 503 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 RPS26P11Q5JNZ5 115 aaPredicted RBP19.79■□□□□ 0.76
SNX1-206ENST00000559389 PRAMEF8Q5VWM4 474 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 PRAMEF7Q5VXH5 474 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms