RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TPOP07202 933 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 VIMP08670 466 aaKnown RBP17.03■□□□□ 0.32
CASC4-209ENST00000559222 OR12D1P0DN82 309 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 HOXB9P17482 250 aaPredicted RBP17.03■□□□□ 0.32
CASC4-209ENST00000559222 CHI3L1P36222 383 aaPredicted RBP17.03■□□□□ 0.32
CASC4-209ENST00000559222 STX1BP61266 288 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 TOMM20Q15388 145 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.03■□□□□ 0.32
CASC4-209ENST00000559222 ARHGAP11AQ6P4F7 1023 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 ZNF621Q6ZSS3 439 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 RNF130Q86XS8 419 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 PLCZ1Q86YW0 608 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 STON2Q8WXE9 905 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 RELTQ969Z4 430 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 LDAHQ9H6V9 325 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 MED11Q9P086 117 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 B4GALT7Q9UBV7 327 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 MRTO4Q9UKD2 239 aaKnown RBP17.03■□□□□ 0.32
CASC4-209ENST00000559222 ABCG2Q9UNQ0 655 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 NCOA6Q14686 2063 aaPredicted RBP17.03■□□□□ 0.32
CASC4-209ENST00000559222 HECTD1Q9ULT8 2610 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 CCL21O00585 134 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 AQP7O14520 342 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 RFXANKO14593 260 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 OIP5O43482 229 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 ZG16O60844 167 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 NCF2P19878 526 aaPredicted RBP17.02■□□□□ 0.32
CASC4-209ENST00000559222 ELAVL4P26378 380 aaKnown RBP17.02■□□□□ 0.32
CASC4-209ENST00000559222 ATP4BP51164 291 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 GYS2P54840 703 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 RCAN2Q14206 197 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 SQLEQ14534 574 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 CD226Q15762 336 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 AGKQ53H12 422 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 BLOC1S3Q6QNY0 202 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 FADS6Q8N9I5 356 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 OR2M3Q8NG83 312 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 NEIL3Q8TAT5 605 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 MIPOL1Q8TD10 442 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 GTF2H4Q92759 462 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 ZNF317Q96PQ6 595 aaPredicted RBP17.02■□□□□ 0.32
CASC4-209ENST00000559222 PAIP1Q9H074 479 aaKnown RBP17.02■□□□□ 0.32
CASC4-209ENST00000559222 DSN1Q9H410 356 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 EXO5Q9H790 373 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 ACKR4Q9NPB9 350 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 QPCTLQ9NXS2 382 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 PPP4R1LQ9P1A2 415 aa17.02■□□□□ 0.32
CASC4-209ENST00000559222 DIDO1Q9BTC0 2240 aaKnown RBP17.01■□□□□ 0.31
CASC4-209ENST00000559222 KDM4EB2RXH2 506 aaPredicted RBP17.01■□□□□ 0.31
CASC4-209ENST00000559222 ANGPTL1O95841 491 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 KRT16P08779 473 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 MVDP53602 400 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 PSMD4P55036 377 aaKnown RBP17.01■□□□□ 0.31
CASC4-209ENST00000559222 ADORA2A-AS1P86434 159 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 NDUFAF6Q330K2 333 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 PAGE3Q5JUK9 113 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 HMGN2P46Q86SG4 172 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 LSRQ86X29 649 aaPredicted RBP17.01■□□□□ 0.31
CASC4-209ENST00000559222 MSRB3Q8IXL7 192 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 MARVELD2Q8N4S9 558 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 CHDHQ8NE62 594 aaPredicted RBP17.01■□□□□ 0.31
CASC4-209ENST00000559222 ZFP90Q8TF47 636 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 DUSP19Q8WTR2 217 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 SSC4DQ8WTU2 575 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 ARSGQ96EG1 525 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 CCDC120Q96HB5 630 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 SDF2Q99470 211 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 TBL1XR1Q9BZK7 514 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 OR2B2Q9GZK3 357 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 SLAMF8Q9P0V8 285 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 KCNE5Q9UJ90 142 aa17.01■□□□□ 0.31
CASC4-209ENST00000559222 WIPF3A6NGB9 483 aa17■□□□□ 0.31
CASC4-209ENST00000559222 ALG1L2C9J202 215 aa17■□□□□ 0.31
CASC4-209ENST00000559222 NPIPB9F8W1W9 429 aa17■□□□□ 0.31
CASC4-209ENST00000559222 HMGN4O00479 90 aa17■□□□□ 0.31
CASC4-209ENST00000559222 SUSD5O60279 629 aa17■□□□□ 0.31
CASC4-209ENST00000559222 FCMRO60667 390 aa17■□□□□ 0.31
CASC4-209ENST00000559222 HCN1O60741 890 aa17■□□□□ 0.31
CASC4-209ENST00000559222 TBXA2RP21731 343 aa17■□□□□ 0.31
CASC4-209ENST00000559222 DCTP40126 519 aa17■□□□□ 0.31
CASC4-209ENST00000559222 KHKP50053 298 aa17■□□□□ 0.31
CASC4-209ENST00000559222 CRYZQ08257 329 aaKnown RBP17■□□□□ 0.31
CASC4-209ENST00000559222 GXYLT1Q4G148 440 aa17■□□□□ 0.31
CASC4-209ENST00000559222 C6orf10Q5SRN2 563 aa17■□□□□ 0.31
CASC4-209ENST00000559222 HEPHL1Q6MZM0 1159 aa17■□□□□ 0.31
CASC4-209ENST00000559222 BHLHB9Q6PI77 547 aa17■□□□□ 0.31
CASC4-209ENST00000559222 MSANTD1Q6ZTZ1 278 aa17■□□□□ 0.31
CASC4-209ENST00000559222 OR4K17Q8NGC6 315 aa17■□□□□ 0.31
CASC4-209ENST00000559222 XAGE5Q8WWM1 108 aa17■□□□□ 0.31
CASC4-209ENST00000559222 SPDL1Q96EA4 605 aa17■□□□□ 0.31
CASC4-209ENST00000559222 NPAS1Q99742 590 aa17■□□□□ 0.31
CASC4-209ENST00000559222 RPH3AQ9Y2J0 694 aaPredicted RBP17■□□□□ 0.31
CASC4-209ENST00000559222 ARHGAP21Q5T5U3 1957 aa17■□□□□ 0.31
CASC4-209ENST00000559222 PHF3Q92576 2039 aaKnown RBP16.99■□□□□ 0.31
CASC4-209ENST00000559222 C15orf38-AP3S2A0A0A6YYH1 394 aa16.99■□□□□ 0.31
CASC4-209ENST00000559222 SHISA8B8ZZ34 492 aa16.99■□□□□ 0.31
CASC4-209ENST00000559222 DYNC1I1O14576 645 aa16.99■□□□□ 0.31
CASC4-209ENST00000559222 PRRG2O14669 202 aa16.99■□□□□ 0.31
CASC4-209ENST00000559222 ZIC3O60481 467 aa16.99■□□□□ 0.31
CASC4-209ENST00000559222 TNFRSF21O75509 655 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms