RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 BEX2Q9BXY8 128 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 TNMDQ9H2S6 317 aa5.1□□□□□ -1.59
RTF1-204ENST00000558117 PPIEQ9UNP9 301 aaKnown RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 EXO1Q9UQ84 846 aaKnown RBP5.1□□□□□ -1.59
RTF1-204ENST00000558117 TEX13DA0A0J9YY54 714 aaPredicted RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 NDC80O14777 642 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 MOCS2O96007 188 aaPredicted RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 PNPP00491 289 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 TPM2P07951 284 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 CDKN1AP38936 164 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 ACY1Q03154 408 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 TUBB2AQ13885 445 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 RBM39Q14498 530 aaKnown RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 MEP1BQ16820 701 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 HYAL4Q2M3T9 481 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 C15orf59Q2T9L4 293 aaPredicted RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 TMEM211Q6ICI0 200 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 CERS6Q6ZMG9 384 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 RBPMS2Q6ZRY4 209 aaKnown RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 ZNF720Q7Z2F6 126 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 PAQR7Q86WK9 346 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 PTOV1Q86YD1 416 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 CBWD2Q8IUF1 395 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 TMEM126BQ8IUX1 230 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 LIX1Q8N485 282 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 C3orf56Q8N813 242 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 C4orf32Q8N8J7 132 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 XXYLT1Q8NBI6 393 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 SIDT2Q8NBJ9 832 aaKnown RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 HAS2Q92819 552 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 SEMA4DQ92854 862 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 SYAP1Q96A49 352 aaPredicted RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 MOAP1Q96BY2 351 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 SCRN2Q96FV2 425 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 RBM18Q96H35 190 aaKnown RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 ZNF514Q96K75 400 aaPredicted RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 PRMT1Q99873 361 aaKnown RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 TRIM51Q9BSJ1 452 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 TUBB2BQ9BVA1 445 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 TRIM7Q9C029 511 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 THAP9Q9H5L6 903 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 TFB2MQ9H5Q4 396 aaKnown RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 ABCC13Q9NSE7 274 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 INTS10Q9NVR2 710 aaKnown RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 DCAF16Q9NXF7 216 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.09□□□□□ -1.59
RTF1-204ENST00000558117 FBXL4Q9UKA2 621 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 MPDZO75970 2070 aa5.09□□□□□ -1.59
RTF1-204ENST00000558117 PCM1Q15154 2024 aa5.09□□□□□ -1.6
RTF1-204ENST00000558117 IGHV5-51A0A0C4DH38 117 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 NPIPA5E9PKD4 350 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 GAS8-AS1O95177 125 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 JCHAINP01591 159 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 UGT2B4P06133 528 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 ZNF30P17039 623 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 TRIM21P19474 475 aaKnown RBP5.08□□□□□ -1.6
RTF1-204ENST00000558117 MMP15P51511 669 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 POLR2FP61218 127 aaKnown RBP5.08□□□□□ -1.6
RTF1-204ENST00000558117 TUBB4BP68371 445 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 CBX3Q13185 183 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 NHSL2Q5HYW2 709 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 KRT79Q5XKE5 535 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 SIAH3Q8IW03 269 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 GPD1LQ8N335 351 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 RPRMLQ8N4K4 120 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 ANKRD20A12PQ8NF67 263 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 OR6K2Q8NGY2 324 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 ZFAND2BQ8WV99 257 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 ZNF501Q96CX3 271 aaPredicted RBP5.08□□□□□ -1.6
RTF1-204ENST00000558117 RUNDC3BQ96NL0 473 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 CCDC106Q9BWC9 280 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 PPIL3Q9H2H8 161 aaKnown RBP5.08□□□□□ -1.6
RTF1-204ENST00000558117 SLA2Q9H6Q3 261 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 CHCHD3Q9NX63 227 aaKnown RBP5.08□□□□□ -1.6
RTF1-204ENST00000558117 PTTG2Q9NZH5 202 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 AMACRQ9UHK6 382 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 PLAGL1Q9UM63 463 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 NPIPA1Q9UND3 350 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 PADI2Q9Y2J8 665 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 WBP11Q9Y2W2 641 aaKnown RBP5.08□□□□□ -1.6
RTF1-204ENST00000558117 FREM1Q5H8C1 2179 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 SPTBP11277 2137 aa5.08□□□□□ -1.6
RTF1-204ENST00000558117 TENM2Q9NT68 2774 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 A0A1W2PPI3 338 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 LRRD1A4D1F6 860 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 KRT87PA6NCN2 255 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 ZNF233A6NK53 670 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 OR6C76A6NM76 312 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 F5H5T6 163 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 TXNL1O43396 289 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 PRPSAP2O60256 369 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 PRKNO60260 465 aaPredicted RBP5.07□□□□□ -1.6
RTF1-204ENST00000558117 PDE9AO76083 593 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 PEX19P40855 299 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 GLIPR1P48060 266 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 DNA2P51530 1060 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 PNLIPRP2P54317 469 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 NUCB2P80303 420 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 SCN1BQ07699 218 aa5.07□□□□□ -1.6
RTF1-204ENST00000558117 ABRQ12979 859 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms