RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GAS1P54826 345 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 GYS2P54840 703 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF141Q15928 474 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 MMEL1Q495T6 779 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 GLYR1Q49A26 553 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-234ENST00000557703 FLYWCH1Q4VC44 716 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 KLHL26Q53HC5 615 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 PAGE3Q5JUK9 113 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 DLEU7Q6UYE1 221 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 WDR53Q7Z5U6 358 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-234ENST00000557703 CMIPQ8IY22 773 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 TOR1AIP2Q8NFQ8 470 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 ROPN1LQ96C74 230 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 FAM107BQ9H098 131 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 UBQLN3Q9H347 655 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF703Q9H7S9 590 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-234ENST00000557703 TUBA8Q9NY65 449 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-234ENST00000557703 SEC14L3Q9UDX4 400 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 NTNG1Q9Y2I2 539 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 C15orf41Q9Y2V0 281 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 WDR45Q9Y484 360 aa12.51□□□□□ -0.41
SHMT2-234ENST00000557703 C15orf38-AP3S2A0A0A6YYH1 394 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 ANKUB1A6NFN9 424 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 LRRC3CA6NJW4 275 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 NPIPB9F8W1W9 429 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 NDUFB5O43674 189 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 EIF4E2O60573 245 aaKnown RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 NME6O75414 186 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 OXSR1O95747 527 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 IGKV1D-16P01601 117 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 HPNP05981 417 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 ST13P50502 369 aaKnown RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 RBBP4Q09028 425 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 SF3B4Q15427 424 aaKnown RBP eCLIP12.5□□□□□ -0.417e-19■■■■□ 22
SHMT2-234ENST00000557703 ZNF630Q2M218 657 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 TRMT5Q32P41 509 aaKnown RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 GRAMD1BQ3KR37 738 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 RUNDC3AQ59EK9 446 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 FNDC7Q5VTL7 733 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 FAM91A1Q658Y4 838 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 TNFAIP8L2Q6P589 184 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 FIGNL1Q6PIW4 674 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 ARPINQ7Z6K5 226 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 DHDDSQ86SQ9 333 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 MTDHQ86UE4 582 aaKnown RBP12.5□□□□□ -0.41
SHMT2-234ENST00000557703 SLC30A8Q8IWU4 369 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 TMEM251Q8N6I4 163 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 OR8J3Q8NGG0 315 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 OR5D16Q8NGK9 328 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 OR4C3Q8NH37 302 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 ANKRD27Q96NW4 1050 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 LRRC37BQ96QE4 947 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 CGREF1Q99674 301 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 MYLK2Q9H1R3 596 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 SERHL2Q9H4I8 314 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 ARMC7Q9H6L4 198 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 EFCAB1Q9HAE3 211 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 PPP4R1LQ9P1A2 415 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 STOML1Q9UBI4 398 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 SLC35A3Q9Y2D2 325 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 DTNAQ9Y4J8 743 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF407Q9C0G0 2248 aa12.5□□□□□ -0.41
SHMT2-234ENST00000557703 A0A087WZY1 265 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 A0A0G2JPF8 293 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 HNRNPCL2B2RXH8 293 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 HNRNPCL3B7ZW38 293 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 NPIPA5E9PKD4 350 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 AQP7O14520 342 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 KIAA0513O60268 411 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 HNRNPCL1O60812 293 aaKnown RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 UNC5CO95185 931 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 ANGPTL1O95841 491 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 HNRNPCL4P0DMR1 293 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 NR2F1P10589 423 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 PLA2G2AP14555 144 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 SRD5A2P31213 254 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 DCTP40126 519 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 RFX3P48380 749 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 MNAT1P51948 309 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 CASP6P55212 293 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 SUMO3P55854 103 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 DSTNP60981 165 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 RPS26P62854 115 aaKnown RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 NFYCQ13952 458 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 UBAP2LQ14157 1087 aaKnown RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 CMPK2Q5EBM0 449 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 NHSL2Q5HYW2 709 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 RNFT1Q5M7Z0 435 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 GFRALQ6UXV0 394 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 CLEC4FQ8N1N0 589 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF619Q8N2I2 560 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 FADS6Q8N9I5 356 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 WDSUB1Q8N9V3 476 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms