RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 ALG2Q9H553 416 aa16.34■□□□□ 0.21
ABCD4-228ENST00000557588 GIMAP4Q9NUV9 329 aa16.34■□□□□ 0.21
ABCD4-228ENST00000557588 XPR1Q9UBH6 696 aa16.34■□□□□ 0.21
ABCD4-228ENST00000557588 LPAR3Q9UBY5 353 aa16.34■□□□□ 0.21
ABCD4-228ENST00000557588 TMCO1Q9UM00 188 aa16.34■□□□□ 0.21
ABCD4-228ENST00000557588 SNX6Q9UNH7 406 aa16.34■□□□□ 0.21
ABCD4-228ENST00000557588 CADP27708 2225 aa16.34■□□□□ 0.21
ABCD4-228ENST00000557588 CXCL13O43927 109 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 PSMG1O95456 288 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 SYNGR4O95473 234 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 IL33O95760 270 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 OTCP00480 354 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 CD8AP01732 235 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 RPS17P08708 135 aaKnown RBP16.33■□□□□ 0.2
ABCD4-228ENST00000557588 CLK3P49761 638 aaKnown RBP16.33■□□□□ 0.2
ABCD4-228ENST00000557588 VLDLRP98155 873 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 BSPH1Q075Z2 132 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 C17orf67Q0P5P2 114 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 DECR1Q16698 335 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 SH2D4BQ5SQS7 431 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 ATG4DQ86TL0 474 aaPredicted RBP16.33■□□□□ 0.2
ABCD4-228ENST00000557588 OR2V1Q8NHB1 315 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 HBEGFQ99075 208 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 RHNO1Q9BSD3 238 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 POTEKPQ9BYX7 375 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 DPH5Q9H2P9 285 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 C12orf49Q9H741 205 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 SLC35C2Q9NQQ7 365 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 GRHL1Q9NZI5 618 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 VDAC3Q9Y277 283 aa16.33■□□□□ 0.2
ABCD4-228ENST00000557588 A0A087WV62 115 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 C7orf72A4D263 438 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 SLITRK5O94991 958 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 FESP07332 822 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 IL32P24001 234 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 SERPINB8P50452 374 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 PRR5P85299 388 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 SFRP5Q5T4F7 317 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 MFSD12Q6NUT3 480 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 TFAP2EQ6VUC0 442 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 ESPNLQ6ZVH7 1005 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 GTPBP8Q8N3Z3 284 aaPredicted RBP16.32■□□□□ 0.2
ABCD4-228ENST00000557588 OR10H5Q8NGA6 315 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 PIWIL2Q8TC59 973 aaKnown RBP16.32■□□□□ 0.2
ABCD4-228ENST00000557588 HSD17B8Q92506 261 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 TNFRSF13CQ96RJ3 184 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 ERP44Q9BS26 406 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 BEX2Q9BXY8 128 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 TBL1XR1Q9BZK7 514 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 Q9N2J8 555 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 VPS29Q9UBQ0 182 aa16.32■□□□□ 0.2
ABCD4-228ENST00000557588 YLPM1P49750 1951 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 A0A087WZY1 265 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 SSX4O60224 188 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 PCDH7O60245 1069 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 DLX3O60479 287 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 ANGPTL1O95841 491 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 HSD3B1P14060 373 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 PSMA4P25789 261 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 HSD3B2P26439 372 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 MPIP34949 423 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 PSMD4P55036 377 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 CASP9P55211 416 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 RAE1P78406 368 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 MRPS25P82663 173 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 LOXL1Q08397 574 aaPredicted RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 HEPACAMQ14CZ8 416 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 TSC22D1Q15714 1073 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 APOOLQ6UXV4 268 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 PLD6Q8N2A8 252 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 RNF128Q8TEB7 428 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 ZNF483Q8TF39 744 aaPredicted RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 KCNK17Q96T54 332 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 USB1Q9BQ65 265 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 FAIMQ9NVQ4 179 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 FBXO34Q9NWN3 711 aa16.31■□□□□ 0.2
ABCD4-228ENST00000557588 MRTO4Q9UKD2 239 aaKnown RBP16.31■□□□□ 0.2
ABCD4-228ENST00000557588 ELOA3DA6NLF2 546 aaPredicted RBP16.3■□□□□ 0.2
ABCD4-228ENST00000557588 PPP6CO00743 305 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 TNFSF11O14788 317 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 ZSCAN12O43309 604 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 GMFGO60234 142 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 UTS2O95399 124 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 TYK2P29597 1187 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 DSCR9P59020 149 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 RAC1P63000 192 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
ABCD4-228ENST00000557588 ELOA3BQ3SY89 546 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 FAM219BQ5XKK7 198 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 GTF2IRD2BQ6EKJ0 949 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 RPS27LQ71UM5 84 aaKnown RBP16.3■□□□□ 0.2
ABCD4-228ENST00000557588 GTF2IRD2Q86UP8 949 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 TDRPQ86YL5 185 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 ZNF619Q8N2I2 560 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 BANPQ8N9N5 519 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 ELOA3Q8NG57 546 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 KISS1RQ969F8 398 aaPredicted RBP16.3■□□□□ 0.2
ABCD4-228ENST00000557588 ZBTB8AQ96BR9 441 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 NPAS1Q99742 590 aa16.3■□□□□ 0.2
ABCD4-228ENST00000557588 KLHL13Q9P2N7 655 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms