RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 INPP5JQ15735 1006 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 CHI3L2Q15782 390 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF750Q32MQ0 723 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ADPRMQ3LIE5 342 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ARL13AQ5H913 290 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ACER2Q5QJU3 275 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SH2D4BQ5SQS7 431 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 BEND6Q5SZJ8 279 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 NDUFAF5Q5TEU4 345 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 RNF220Q5VTB9 566 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SPINK14Q6IE38 97 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 VWA1Q6PCB0 445 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 IL20RBQ6UXL0 311 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 LRIG3Q6UXM1 1119 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 HSDL2Q6YN16 418 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 Q6ZNX1 250 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 C16orf47Q6ZP98 133 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 QSOX2Q6ZRP7 698 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 COMMD6Q7Z4G1 85 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 CUZD1Q86UP6 607 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 CRLF3Q8IUI8 442 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 CLYBLQ8N0X4 340 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 BEST3Q8N1M1 668 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 METTL4Q8N3J2 472 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SLC5A8Q8N695 610 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SLC15A4Q8N697 577 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 RBMXL3Q8N7X1 1067 aaKnown RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 B3GNT7Q8NFL0 401 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 TOR1AIP2Q8NFQ8 470 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ADAMTS18Q8TE60 1221 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 AGAP11Q8TF27 550 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 DYDC1Q8WWB3 177 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 LRTOMTQ8WZ04 291 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 DAZLQ92904 295 aaKnown RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 RIT1Q92963 219 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 NCLNQ969V3 563 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 EXOSC8Q96B26 276 aaKnown RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ANKRD9Q96BM1 317 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 TM4SF18Q96CE8 201 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 KLHL29Q96CT2 875 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 C19orf60Q96EN9 201 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 APIPQ96GX9 242 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 IMMP1LQ96LU5 166 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 C5orf34Q96MH7 638 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 MOGAT1Q96PD6 335 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 BBS4Q96RK4 519 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 GAL3ST4Q96RP7 486 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF382Q96SR6 550 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM109Q9BVC6 243 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SPATA5L1Q9BVQ7 753 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 FAIM2Q9BWQ8 316 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SLC29A3Q9BZD2 475 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 TOR3AQ9H497 397 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 DDX31Q9H8H2 851 aaKnown RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 BRF2Q9HAW0 419 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 GIMAP4Q9NUV9 329 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PSD3Q9NYI0 1048 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 SENP1Q9P0U3 644 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 COPS7AQ9UBW8 275 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 BAIAP2L1Q9UHR4 511 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ANAPC2Q9UJX6 822 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF225Q9UK10 706 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PACSIN3Q9UKS6 424 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 VPS4AQ9UN37 437 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 B3GNT3Q9Y2A9 372 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 DLGAP4Q9Y2H0 992 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 MMACHCQ9Y4U1 282 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 POLR3HQ9Y535 204 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ASB4Q9Y574 426 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 CSAG2Q9Y5P2 127 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ZFHX4Q86UP3 3567 aa4.31□□□□□ -1.72
ATXN3-238ENST00000556288 PHF3Q92576 2039 aaKnown RBP4.31□□□□□ -1.72
ATXN3-238ENST00000556288 ATMQ13315 3056 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ZFYVE26Q68DK2 2539 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 MPDZO75970 2070 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 HEATR5AQ86XA9 2040 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 LOC102723996A0A087X1L8 192 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 A0A0A6YYD5 115 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ATP6AP2A0A1C7CYW4 349 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM120BA0PK00 339 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 C1orf226A1L170 272 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SAGE2PA6NJ88 616 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 GABRR3A8MPY1 467 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM233B4DJY2 109 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 J3QKU1 62 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ITM2AO43736 263 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ATP6AP2O75787 350 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 CEACAM4O75871 244 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 ZWINTO95229 277 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 AIFM1O95831 613 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 HRGP04196 525 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 CHRNGP07510 517 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 IL3P08700 152 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PPP3CBP16298 524 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 PORP16435 677 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 CSNK2A2P19784 350 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 TSFMP43897 325 aaKnown RBP4.3□□□□□ -1.72
ATXN3-238ENST00000556288 STT3AP46977 705 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 SLC1A6P48664 564 aa4.3□□□□□ -1.72
ATXN3-238ENST00000556288 CYB561P49447 251 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms