RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CDH10Q9Y6N8 788 aa1.93□□□□□ -2.1
SNX6-204ENST00000555541 SCN2AQ99250 2005 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 IGHV1OR15-1A0A075B7D0 117 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 FBLL1A6NHQ2 334 aaKnown RBP1.92□□□□□ -2.1
SNX6-204ENST00000555541 CCDC69A6NI79 296 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 SAGE2PA6NJ88 616 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 C19orf81C9J6K1 198 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 IMPA2O14732 288 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 ICOSLGO75144 302 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 JCHAINP01591 159 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 OR8U8P0C7N1 319 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 ZNF18P17022 549 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 CCNA2P20248 432 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 ADORA2BP29275 332 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 BTDP43251 543 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 RPL29P47914 159 aaKnown RBP1.92□□□□□ -2.1
SNX6-204ENST00000555541 CNN1P51911 297 aaKnown RBP1.92□□□□□ -2.1
SNX6-204ENST00000555541 RND3P61587 244 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 MRPS11P82912 194 aaKnown RBP1.92□□□□□ -2.1
SNX6-204ENST00000555541 PAX5Q02548 391 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 ZP4Q12836 540 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 SLMAPQ14BN4 828 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 PKN2Q16513 984 aaKnown RBP1.92□□□□□ -2.1
SNX6-204ENST00000555541 SLC39A12Q504Y0 691 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 CYBRD1Q53TN4 286 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 BEND6Q5SZJ8 279 aaPredicted RBP1.92□□□□□ -2.1
SNX6-204ENST00000555541 TMED8Q6PL24 325 aaPredicted RBP1.92□□□□□ -2.1
SNX6-204ENST00000555541 OR2AP1Q8NGE2 309 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 MBOAT4Q96T53 435 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 CBWD1Q9BRT8 395 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 NDUFAF3Q9BU61 184 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 SLC5A7Q9GZV3 580 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 NANSQ9NR45 359 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 ANKMY1Q9P2S6 941 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 RAD54L2Q9Y4B4 1467 aa1.92□□□□□ -2.1
SNX6-204ENST00000555541 MACROD2A1Z1Q3 448 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 PSMB11A5LHX3 300 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 FAM166BA8MTA8 275 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 PPIHO43447 177 aaKnown RBP1.91□□□□□ -2.1
SNX6-204ENST00000555541 NPIPB7O75200 414 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 IGHV4-34P06331 123 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 GLULP15104 373 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 MAGEA4P43358 317 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 EMDP50402 254 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 PLOD1Q02809 727 aaPredicted RBP1.91□□□□□ -2.1
SNX6-204ENST00000555541 ZNF154Q13106 437 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 NME3Q13232 169 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 TSTA3Q13630 321 aaPredicted RBP1.91□□□□□ -2.1
SNX6-204ENST00000555541 PARP6Q2NL67 630 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 LRIT3Q3SXY7 679 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 GOLGA7Q7Z5G4 137 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 ZNF410Q86VK4 478 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 SERPINA9Q86WD7 417 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 SKA3Q8IX90 412 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 BPIFB2Q8N4F0 458 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 OR9A1PQ8NGU1 263 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 ART4Q93070 314 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 TADA1Q96BN2 335 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 JAKMIP1Q96N16 626 aaKnown RBP1.91□□□□□ -2.1
SNX6-204ENST00000555541 SLC17A9Q9BYT1 436 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 MMADHCQ9H3L0 296 aaPredicted RBP1.91□□□□□ -2.1
SNX6-204ENST00000555541 FANCFQ9NPI8 374 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 GHRLQ9UBU3 117 aa1.91□□□□□ -2.1
SNX6-204ENST00000555541 SAMD4AQ9UPU9 718 aaKnown RBP1.91□□□□□ -2.1
SNX6-204ENST00000555541 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.91□□□□□ -2.1
SNX6-204ENST00000555541 TLR4O00206 839 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 DLGAP1O14490 977 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 EFNA2O43921 213 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 SLC35G4P0C7Q5 338 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 NTSP30990 170 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 RPL4P36578 427 aaKnown RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 CASP9P55211 416 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 LIM2P55344 173 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 SSTP61278 116 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 KRT83P78385 493 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 ROR1Q01973 937 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 SRYQ05066 204 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 BTG3Q14201 252 aaPredicted RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 PTGES3Q15185 160 aaKnown RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 UBE2V2Q15819 145 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 ZSWIM7Q19AV6 140 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 CFAP221Q4G0U5 840 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 LIPKQ5VXJ0 399 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 SLX4IPQ5VYV7 408 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 OLFM4Q6UX06 510 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 BTNL3Q6UXE8 466 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 ZNF562Q6V9R5 426 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 NET1Q7Z628 596 aaPredicted RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 UNC45BQ8IWX7 931 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 MDS2Q8NDY4 140 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 OR9A4Q8NGU2 314 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 WDR36Q8NI36 951 aaKnown RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 PHYHIPQ92561 330 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 KAT8Q9H7Z6 458 aaKnown RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 CAB39LQ9H9S4 337 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 RBM28Q9NW13 759 aaKnown RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 ZNF282Q9UDV7 671 aaPredicted RBP1.9□□□□□ -2.11
SNX6-204ENST00000555541 FAM153AQ9UHL3 310 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 THSD7BQ9C0I4 1608 aa1.9□□□□□ -2.11
SNX6-204ENST00000555541 SMIM28A0A1B0GU29 152 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms