RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SATB2Q9UPW6 733 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 THADAQ6YHU6 1953 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 TGFBR3LH3BV60 316 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 GPX5O75715 221 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 SCG5P05408 212 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 IFNA8P32881 189 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 GABRA3P34903 492 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 PLAURQ03405 335 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 SPHARQ15513 63 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 PRTGQ2VWP7 1150 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 ZNF404Q494X3 552 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 MBOAT2Q6ZWT7 520 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 ARL14Q8N4G2 192 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 OR4Q3Q8NH05 313 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 STACQ99469 402 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 MAP3K3Q99759 626 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 PRSS27Q9BQR3 290 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 KIAA0513O60268 411 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 APOL3O95236 402 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 FPR3P25089 353 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 NUDT1P36639 197 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 PSMD7P51665 324 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 ZC3H14Q6PJT7 736 aaKnown RBP22.57■■□□□ 1.2
TMEM260-207ENST00000555497 CAPN10Q9HC96 672 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 CARD8Q9Y2G2 431 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 USP34Q70CQ2 3546 aa22.57■■□□□ 1.2
TMEM260-207ENST00000555497 CDC42EP2O14613 210 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 ETV5P41161 510 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 ETV1P50549 477 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 RNLSQ5VYX0 342 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 SLC30A6Q6NXT4 461 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 WDR88Q6ZMY6 472 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 CYP4Z2PQ8N1L4 340 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 OR52R1Q8NGF1 315 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 CACYBPQ9HB71 228 aaKnown RBP22.56■■□□□ 1.2
TMEM260-207ENST00000555497 HCN3Q9P1Z3 774 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 DIMT1Q9UNQ2 313 aaKnown RBP22.56■■□□□ 1.2
TMEM260-207ENST00000555497 PCDH15Q96QU1 1955 aa22.56■■□□□ 1.2
TMEM260-207ENST00000555497 A0A1W2PR77 199 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 CH25HO95992 272 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 CSF2P04141 144 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 DBIP07108 87 aaKnown RBP22.55■■□□□ 1.2
TMEM260-207ENST00000555497 NID1P14543 1247 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 S1PR1P21453 382 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 EIPR1Q53HC9 387 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 ZCCHC12Q6PEW1 402 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 KBTBD8Q8NFY9 601 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 COX4I2Q96KJ9 171 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 MND1Q9BWT6 205 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 NXF2Q9GZY0 626 aaKnown RBP22.55■■□□□ 1.2
TMEM260-207ENST00000555497 IL20RAQ9UHF4 553 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 WWP2O00308 870 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 FOXS1O43638 330 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 LYPD3O95274 346 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 SLC35E2P0CK97 266 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 STAT5AP42229 794 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 CCDC85BQ15834 202 aaPredicted RBP22.55■■□□□ 1.2
TMEM260-207ENST00000555497 RGS21Q2M5E4 152 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 PROKR2Q8NFJ6 384 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 LMX1AQ8TE12 382 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 SNRNP27Q8WVK2 155 aaKnown RBP22.55■■□□□ 1.2
TMEM260-207ENST00000555497 MMP27Q9H306 513 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 UBE2ZQ9H832 354 aaPredicted RBP22.55■■□□□ 1.2
TMEM260-207ENST00000555497 IL20Q9NYY1 176 aa22.55■■□□□ 1.2
TMEM260-207ENST00000555497 CDHR4A6H8M9 788 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 OR2W5A6NFC9 320 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 BRINP1O60477 761 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 ZNF217O75362 1048 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 POU6F2P78424 691 aaPredicted RBP22.54■■□□□ 1.2
TMEM260-207ENST00000555497 FLYWCH1Q4VC44 716 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 VWA5B2Q8N398 1253 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 HRKO00198 91 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 RAB36O95755 333 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 MAT1AQ00266 395 aaKnown RBP22.54■■□□□ 1.2
TMEM260-207ENST00000555497 ZNF155Q12901 538 aaPredicted RBP22.54■■□□□ 1.2
TMEM260-207ENST00000555497 ERV3-1Q14264 604 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 SLC36A4Q6YBV0 504 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 ANKK1Q8NFD2 765 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 HOXB13Q92826 284 aaPredicted RBP22.54■■□□□ 1.2
TMEM260-207ENST00000555497 ABHD8Q96I13 439 aa22.54■■□□□ 1.2
TMEM260-207ENST00000555497 TNRC18O15417 2968 aaPredicted RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 METTL12A8MUP2 240 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 OR10H2O60403 315 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 CDC123O75794 336 aaPredicted RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 NME1P15531 152 aaKnown RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 CD27P26842 260 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 CD38P28907 300 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 OR1Q1Q15612 314 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 PERM1Q5SV97 790 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 ZNF620Q6ZNG0 422 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 RANBP3LQ86VV4 465 aaPredicted RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 RNFT2Q96EX2 444 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 TRMT61AQ96FX7 289 aaKnown RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 PEX11GQ96HA9 241 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 PHOX2BQ99453 314 aa22.53■■□□□ 1.2
TMEM260-207ENST00000555497 POLR2J2Q9GZM3 115 aaKnown RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 C6orf62Q9GZU0 229 aaPredicted RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 MRPS18AQ9NVS2 196 aaKnown RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 CCDC59Q9P031 241 aaKnown RBP22.53■■□□□ 1.2
TMEM260-207ENST00000555497 ABCA7Q8IZY2 2146 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms