RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ACSS1Q9NUB1 689 aaPredicted RBP13.98□□□□□ -0.17
BRF1-220ENST00000552127 SH3BP4Q9P0V3 963 aa13.98□□□□□ -0.17
BRF1-220ENST00000552127 ZDHHC2Q9UIJ5 367 aa13.98□□□□□ -0.17
BRF1-220ENST00000552127 DKKL1Q9UK85 242 aa13.98□□□□□ -0.17
BRF1-220ENST00000552127 FBXL2Q9UKC9 423 aa13.98□□□□□ -0.17
BRF1-220ENST00000552127 MRTO4Q9UKD2 239 aaKnown RBP13.98□□□□□ -0.17
BRF1-220ENST00000552127 ABCG2Q9UNQ0 655 aa13.98□□□□□ -0.17
BRF1-220ENST00000552127 NUP214P35658 2090 aaPredicted RBP13.97□□□□□ -0.17
BRF1-220ENST00000552127 SCAMP2O15127 329 aaKnown RBP13.97□□□□□ -0.17
BRF1-220ENST00000552127 SCO2O43819 266 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 PEX11AO75192 247 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 IL33O95760 270 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 EPXP11678 715 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 PRPS2P11908 318 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 DDX5P17844 614 aaKnown RBP13.97□□□□□ -0.17
BRF1-220ENST00000552127 WNT3P56703 355 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 GAB1Q13480 694 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 NSUN5P2Q63ZY6 315 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 PODNL1Q6PEZ8 512 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 LRIG3Q6UXM1 1119 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 R3HCC1LQ7Z5L2 792 aaKnown RBP13.97□□□□□ -0.17
BRF1-220ENST00000552127 YTHDF3Q7Z739 585 aaKnown RBP13.97□□□□□ -0.17
BRF1-220ENST00000552127 NUDCD3Q8IVD9 361 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 NAXEQ8NCW5 288 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 TNIP2Q8NFZ5 429 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 PPP1R14CQ8TAE6 165 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 HOXB13Q92826 284 aaPredicted RBP13.97□□□□□ -0.17
BRF1-220ENST00000552127 C3orf30Q96M34 536 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 MS4A4EQ96PG1 132 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 C1orf50Q9BV19 199 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 C3orf14Q9HBI5 128 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 FAM120CQ9NX05 1096 aaKnown RBP13.97□□□□□ -0.17
BRF1-220ENST00000552127 TAS2R10Q9NYW0 307 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 FLRT3Q9NZU0 649 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 PPP4R1LQ9P1A2 415 aa13.97□□□□□ -0.17
BRF1-220ENST00000552127 A0A1W2PPR1 153 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 CD8B2A6NJW9 211 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 CLCA1A8K7I4 914 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 C17orf51A8MQB3 221 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 B4DXG7 233 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 TM9SF1O15321 606 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 FADS1O60427 444 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 SMPD2O60906 423 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 HSPA4LO95757 839 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 CEACAM8P31997 349 aaPredicted RBP13.96□□□□□ -0.17
BRF1-220ENST00000552127 TIMP3P35625 211 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 RPL3P39023 403 aaKnown RBP13.96□□□□□ -0.17
BRF1-220ENST00000552127 PSMD4P55036 377 aaKnown RBP13.96□□□□□ -0.17
BRF1-220ENST00000552127 MANFP55145 182 aaKnown RBP13.96□□□□□ -0.17
BRF1-220ENST00000552127 GFRA1P56159 465 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 RCAN2Q14206 197 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 PTGR1Q14914 329 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 VPS26BQ4G0F5 336 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 C6orf136Q5SQH8 315 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 CEP85LQ5SZL2 805 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 OR5M10Q6IEU7 315 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 ENPP6Q6UWR7 440 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 PRSS57Q6UWY2 283 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 SZRD1Q7Z422 152 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 EXOC3L1Q86VI1 746 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 RELL2Q8NC24 303 aaPredicted RBP13.96□□□□□ -0.17
BRF1-220ENST00000552127 NUP43Q8NFH3 380 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 OR4K17Q8NGC6 315 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 CEP70Q8NHQ1 597 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 RNASE6Q93091 150 aaKnown RBP13.96□□□□□ -0.17
BRF1-220ENST00000552127 ZIM3Q96PE6 472 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 TRIB1Q96RU8 372 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 CENPHQ9H3R5 247 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 NTMQ9P121 344 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 ATP6V1HQ9UI12 483 aa13.96□□□□□ -0.17
BRF1-220ENST00000552127 MRPS18CQ9Y3D5 142 aaKnown RBP13.96□□□□□ -0.17
BRF1-220ENST00000552127 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 GXYLT2A0PJZ3 443 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 WDR91A4D1P6 747 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 MBD3L4A6NDZ8 208 aaPredicted RBP13.95□□□□□ -0.18
BRF1-220ENST00000552127 MBD3L3A6NE82 208 aaPredicted RBP13.95□□□□□ -0.18
BRF1-220ENST00000552127 TUBAL3A6NHL2 446 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 MBD3L5A6NJ08 208 aaPredicted RBP13.95□□□□□ -0.18
BRF1-220ENST00000552127 H0Y3Z8 333 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 HAX1O00165 279 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 DVL2O14641 736 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 BIRC5O15392 142 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 EMC8O43402 210 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 LYPLA1O75608 230 aaPredicted RBP13.95□□□□□ -0.18
BRF1-220ENST00000552127 NKX2-2O95096 273 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 KCNH1O95259 989 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 IL2RAP01589 272 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 SERPINE1P05121 402 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 TUBBP07437 444 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 CPN1P15169 458 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 EFNA1P20827 205 aaPredicted RBP13.95□□□□□ -0.18
BRF1-220ENST00000552127 DPP4P27487 766 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 GABRA3P34903 492 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 MAP3K8P41279 467 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 RFX3P48380 749 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 PRKAG1P54619 331 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 STX5Q13190 355 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 MLC1Q15049 377 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 POU4F3Q15319 338 aa13.95□□□□□ -0.18
BRF1-220ENST00000552127 CHI3L2Q15782 390 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms