RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 SIX6O95475 246 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 NFATC1O95644 943 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 UGT2B7P16662 529 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 F8A1P23610 371 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 BUD31P41223 144 aaPredicted RBP11.46□□□□□ -0.58
ERBB3-219ENST00000551242 SLC3A1Q07837 685 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 OR5M10Q6IEU7 315 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 RETSATQ6NUM9 610 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 TPRG1Q6ZUI0 275 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 CEACAM19Q7Z692 300 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 OR11G2Q8NGC1 345 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 HERVK_113Q902F9 699 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 ATOH1Q92858 354 aaPredicted RBP11.46□□□□□ -0.58
ERBB3-219ENST00000551242 KLK6Q92876 244 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 ECHDC3Q96DC8 303 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 ALG14Q96F25 216 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 TMEM169Q96HH4 297 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 QRSL1Q9H0R6 528 aaKnown RBP11.46□□□□□ -0.58
ERBB3-219ENST00000551242 SLC6A17Q9H1V8 727 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 WDR26Q9H7D7 661 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 PIPOXQ9P0Z9 390 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 GLS2Q9UI32 602 aa11.46□□□□□ -0.58
ERBB3-219ENST00000551242 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 DNASE2O00115 360 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 MID1O15344 667 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 INPPL1O15357 1258 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 FGF2P09038 288 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 NFYAP23511 347 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PDHA2P29803 388 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 COL9A2Q14055 689 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 OR52N1Q8NH53 320 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 FAIM2Q9BWQ8 316 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 OR51I1Q9H343 314 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 HCSTQ9UBK5 93 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 TRPC4Q9UBN4 977 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PRELID3BQ9Y3B1 194 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 ZNF106Q9H2Y7 1883 aaKnown RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 TSPAN6O43657 245 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PTP4A3O75365 173 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PBLDP30039 288 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 RAD52P43351 418 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 STXBP1P61764 594 aaKnown RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 TBPL1P62380 186 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 HTR4Q13639 388 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 HLXQ14774 488 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SYTL3Q4VX76 610 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SLC25A25Q6KCM7 469 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SEZ6L2Q6UXD5 910 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 NHLRC1Q6VVB1 395 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 RRM2BQ7LG56 351 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SERINC5Q86VE9 423 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 CPOQ8IVL8 374 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 CPXM2Q8N436 756 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 CLRN3Q8NCR9 226 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 OR13C5Q8NGS8 318 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 OR56A3Q8NH54 315 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SMAP2Q8WU79 429 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 RFKQ969G6 155 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SLC6A15Q9H2J7 730 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 MED20Q9H944 212 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SLC35C2Q9NQQ7 365 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 TEX10Q9NXF1 929 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PCDHGA9Q9Y5G4 932 aaKnown RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 MCRIP1C9JLW8 97 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PRR23D1E9PI22 279 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 ARPC5O15511 151 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 ZNF821O75541 412 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SLCO2B1O94956 709 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 IGHA1P01876 353 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PRR23D2P0DMB1 279 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 NR2F1P10589 423 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 GSTM3P21266 225 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 SERPINA4P29622 427 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 AHRP35869 848 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 RPL3P39023 403 aaKnown RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 OC90Q02509 493 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 ACSM1Q08AH1 577 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 KLF9Q13886 244 aaPredicted RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 RPTNQ6XPR3 784 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 KRT78Q8N1N4 520 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 TMEM99Q8N816 258 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 PLD4Q96BZ4 506 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
ERBB3-219ENST00000551242 TIMP4Q99727 224 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 UQCC2Q9BRT2 126 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 YIPF4Q9BSR8 244 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 BABAM2Q9NXR7 383 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 CLEC4EQ9ULY5 219 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 RCE1Q9Y256 329 aa11.45□□□□□ -0.58
ERBB3-219ENST00000551242 LRRN3E7EW58 273 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 NPC1O15118 1278 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 ARPC1BO15143 372 aaKnown RBP11.44□□□□□ -0.58
ERBB3-219ENST00000551242 SURF4O15260 269 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 UBL3O95164 117 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 WDPCPO95876 746 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 NPPBP16860 134 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 ACVR1BP36896 505 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 GDNFP39905 211 aa11.44□□□□□ -0.58
ERBB3-219ENST00000551242 GPR4P46093 362 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms