RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 OR2M4Q96R27 311 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 NDEL1Q9GZM8 345 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 BTBD1Q9H0C5 482 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 CCDC86Q9H6F5 360 aaKnown RBP12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 IL21RQ9HBE5 538 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 CPNE5Q9HCH3 593 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 C20orf141Q9NUB4 165 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 KCND3Q9UK17 655 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 TBC1D24Q9ULP9 559 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 COLEC10Q9Y6Z7 277 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 MAP1BP46821 2468 aaKnown RBP12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 LRRK1Q38SD2 2015 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 FAM240BA0A1B0GVZ2 78 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 A0A1W2PRQ8 180 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 SNTNA6NMZ2 147 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 DYRK3O43781 588 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 CTSVO60911 334 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 UBXN7O94888 489 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 F3P13726 295 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 PRKCDQ05655 676 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF155Q12901 538 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 MAPK14Q16539 360 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 ITPRIPL2Q3MIP1 535 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 PUS10Q3MIT2 529 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 CNIH2Q6PI25 160 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 RNF44Q7L0R7 432 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 ASPGQ86U10 573 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 OR4K14Q8NGD5 310 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 OR56A1Q8NGH5 318 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 OR4Q3Q8NH05 313 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 RERGQ96A58 199 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 ZFP3Q96NJ6 502 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 C11orf54Q9H0W9 315 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 TCEAL2Q9H3H9 227 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 RANGRFQ9HD47 186 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 TMA7Q9Y2S6 64 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 PCDHGA4Q9Y5G9 962 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 OBSL1O75147 1896 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 CELSR3Q9NYQ7 3312 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 A0A1W2PRG6 482 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 CARNS1A5YM72 827 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 CENPXA8MT69 81 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 PAHP00439 452 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 TLX1P31314 330 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 HNRNPFP52597 415 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 ODF4Q2M2E3 257 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 KLHL22Q53GT1 634 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 TMEM196Q5HYL7 178 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 LRRC25Q8N386 305 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 Q8N402 240 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 PHF21AQ96BD5 680 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 SDHCQ99643 169 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 MENTQ9BUN1 341 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 CFHR5Q9BXR6 569 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 HDAC8Q9BY41 377 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 FKBP14Q9NWM8 211 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 CCDC59Q9P031 241 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 GRIP1Q9Y3R0 1128 aa12.77□□□□□ -0.37
PRPF40B-209ENST00000548825 FAM186AA6NE01 2351 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF670-ZNF695F2Z2N8 137 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 PTTG1O95997 202 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 C5AR1P21730 350 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 HSD17B2P37059 387 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 PXNP49023 591 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 LBX1P52954 281 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 FLYWCH1Q4VC44 716 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 TUBA3EQ6PEY2 450 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 PLET1Q6UQ28 207 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 GDF7Q7Z4P5 450 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 NRROSQ86YC3 692 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 ARL14Q8N4G2 192 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 KIAA1958Q8N8K9 716 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 OR52L1Q8NGH7 329 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 OR13C5Q8NGS8 318 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 RLN3Q8WXF3 142 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 SLC25A19Q9HC21 320 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 HINT3Q9NQE9 182 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 HRASLS2Q9NWW9 162 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 NKIRAS2Q9NYR9 191 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 HCN3Q9P1Z3 774 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 ZNF624Q9P2J8 865 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 MTCL1Q9Y4B5 1905 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 DAPL1A0PJW8 107 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 ISPDA4D126 451 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 A8MUA0 341 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 PRODHO43272 600 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 CTSBP07858 339 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 PKLRP30613 574 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 ADPRHP54922 357 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 RHAGQ02094 409 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 TMEM163Q8TC26 289 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 APOBEC4Q8WW27 367 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 OR2A14Q96R47 310 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 KATNB1Q9BVA0 655 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
PRPF40B-209ENST00000548825 A0A0B4J203 849 aa12.75□□□□□ -0.37
PRPF40B-209ENST00000548825 PROM1O43490 865 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms