RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 NDUFB2O95178 105 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 BDKRB2P30411 391 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 CD68P34810 354 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 CCR9P51686 369 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 MGAT3Q09327 533 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 B3GNT9Q6UX72 402 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SUMF2Q8NBJ7 301 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 OR5H2Q8NGV7 314 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 PGAP2Q9UHJ9 254 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ETV7Q9Y603 341 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 KPTNQ9Y664 436 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 GABRPO00591 440 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 FZD7O75084 574 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 DUSP11O75319 330 aaKnown RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 DIRAS3O95661 229 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 RAB4BP61018 213 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 FKBP1BP68106 108 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SELENBP1Q13228 472 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 HIST2H3AQ71DI3 136 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 SHFQ7M4L6 423 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 ALOXE3Q9BYJ1 711 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 RBM38Q9H0Z9 239 aaKnown RBP12.11□□□□□ -0.47
PTCH1-212ENST00000546744 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
PTCH1-212ENST00000546744 A8MVJ9 347 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 RGS11O94810 467 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 HBE1P02100 147 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 GP1BBP13224 206 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SPI1P17947 270 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SSTR2P30874 369 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SUOXP51687 545 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 NRG3P56975 720 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 PRPS1P60891 318 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SSTP61278 116 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 CLLU1Q5K131 121 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 MAVSQ7Z434 540 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 NAGSQ8N159 534 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 NUP43Q8NFH3 380 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 CD200R1Q8TD46 325 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 GPR152Q8TDT2 470 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 RNF128Q8TEB7 428 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 CENPOQ9BU64 300 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SDHAF3Q9NRP4 125 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 POT1Q9NUX5 634 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 COPS3Q9UNS2 423 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 WASF3Q9UPY6 502 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 TMEM129A0AVI4 362 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 FAM72CH0Y354 149 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SEC14L5O43304 696 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 DCNP07585 359 aaKnown RBP12.1□□□□□ -0.47
PTCH1-212ENST00000546744 ADH7P40394 386 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 GTDC1Q4AE62 458 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 FAM72AQ5TYM5 149 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 FAM72DQ6L9T8 149 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 PLBD1Q6P4A8 553 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF704Q6ZNC4 412 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-212ENST00000546744 FAM72BQ86X60 149 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 FAM217AQ8IXS0 508 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 LFNGQ8NES3 379 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 OR8J2Q8NGG1 315 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 C12orf10Q9HB07 376 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 ZMAT5Q9UDW3 170 aaKnown RBP12.1□□□□□ -0.47
PTCH1-212ENST00000546744 TNFRSF10BO14763 440 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 MRPL3P09001 348 aaKnown RBP12.1□□□□□ -0.47
PTCH1-212ENST00000546744 ACPPP15309 386 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 CCKBRP32239 447 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 AQP2P41181 271 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 DAPP51397 102 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 TAS2R38P59533 333 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 GPR50Q13585 617 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 DYRK1AQ13627 763 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 PTPRRQ15256 657 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF648Q5T619 568 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SPATC1Q76KD6 591 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 NDUFAF7Q7L592 441 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 CPOQ8IVL8 374 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SLC25A46Q96AG3 418 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 LMLNQ96KR4 655 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 C3orf30Q96M34 536 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 C1QTNF2Q9BXJ5 285 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 SLC19A3Q9BZV2 496 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 IL20Q9NYY1 176 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 OSGIN1Q9UJX0 560 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 TMPRSS11EQ9UL52 423 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 Q9Y3F1 56 aa12.1□□□□□ -0.47
PTCH1-212ENST00000546744 TMEM200CA6NKL6 621 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 OR7A17O14581 309 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 PTHP01270 115 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ARAFP10398 606 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SSTR4P31391 388 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 LSSP48449 732 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 TRA2BP62995 288 aaKnown RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 FLYWCH1Q4VC44 716 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF425Q6IV72 752 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 RPL22L1Q6P5R6 122 aaKnown RBP12.09□□□□□ -0.47
PTCH1-212ENST00000546744 GLB1L2Q8IW92 636 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 ARHGAP12Q8IWW6 846 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 SGPP2Q8IWX5 399 aa12.09□□□□□ -0.47
PTCH1-212ENST00000546744 CLECL1Q8IZS7 167 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms