RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 VRK2Q86Y07 508 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ANKRD60Q9BZ19 345 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 OR2S2Q9NQN1 319 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 LRIT1Q9P2V4 623 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 PTRH2Q9Y3E5 179 aaKnown RBP12.06□□□□□ -0.48
CHD4-211ENST00000544484 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 M0R036 132 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 NUDT7P0C024 238 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 IGFBP6P24592 240 aaPredicted RBP12.06□□□□□ -0.48
CHD4-211ENST00000544484 SLC5A12Q1EHB4 618 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 XKRXQ6PP77 449 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 TANKQ92844 425 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ARRDC3Q96B67 414 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 BMFQ96LC9 184 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 FN3KQ9H479 309 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ZNF226Q9NYT6 803 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ANXA3P12429 323 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 CD38P28907 300 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 OR1D4P47884 311 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 TUBB3Q13509 450 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 PROX2Q3B8N5 592 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 MS4A15Q8N5U1 240 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 OR5AK2Q8NH90 309 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 RTP3Q9BQQ7 232 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ALG8Q9BVK2 526 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 TMEM168Q9H0V1 697 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 FKBP14Q9NWM8 211 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 MLXQ9UH92 298 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 TRIM64A6NGJ6 449 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 HMGB3O15347 200 aaKnown RBP12.06□□□□□ -0.48
CHD4-211ENST00000544484 F3P13726 295 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 MECP2P51608 486 aaKnown RBP12.06□□□□□ -0.48
CHD4-211ENST00000544484 SLC26A5P58743 744 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 LYSMD4Q5XG99 296 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 FAM205BPQ63HN1 556 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 GTF2H4Q92759 462 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 PPP1R14BQ96C90 147 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 C7orf34Q96L11 122 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 TAAR2Q9P1P5 351 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 ABCG2Q9UNQ0 655 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 KCNIP3Q9Y2W7 256 aa12.06□□□□□ -0.48
CHD4-211ENST00000544484 KRBA1A5PL33 1030 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 HBQ1P09105 142 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 RPE65Q16518 533 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 NTRK2Q16620 822 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 FOXN4Q96NZ1 517 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 CLMPQ9H6B4 373 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 HHLA1C9JL84 531 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 ARNTLO00327 626 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 ERVK-25P63136 954 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 PRDX1Q06830 199 aaKnown RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 ARSKQ6UWY0 536 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 ENY2Q9NPA8 101 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 GGT3PA6NGU5 568 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 J3KTA2 159 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 M0R233 179 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 CD6P30203 668 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 TNFRSF4P43489 277 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 FASLGP48023 281 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 ART1P52961 327 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 MALLQ13021 153 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 NFATC4Q14934 902 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 TAZQ16635 292 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 ZNF181Q2M3W8 571 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 RTN4RL1Q86UN2 441 aaPredicted RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 TMEM174Q8WUU8 243 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 UTP4Q969X6 686 aaKnown RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 CREB3L1Q96BA8 519 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 OR4K3Q96R72 315 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 SYNPO2LQ9H987 977 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 NLKQ9UBE8 527 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 HS3ST2Q9Y278 367 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 A0A1W2PQL4 384 aaPredicted RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 FAM183AA6NL82 134 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 H2AFB2P0C5Z0 115 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 HYAL4Q2M3T9 481 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 UGT2A3Q6UWM9 527 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 PAPD5Q8NDF8 572 aaKnown RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 NDNFQ8TB73 568 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 FAM71F1Q96KD3 344 aaPredicted RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 SFXN2Q96NB2 322 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 OR7D2Q96RA2 312 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 TRAV27A0A087WT01 109 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 ERCC1P07992 297 aaPredicted RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 TMEM225BP0DP42 221 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 UBL4AP11441 157 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 MAT1AQ00266 395 aaKnown RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 FAM76BQ5HYJ3 339 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 PIWIL3Q7Z3Z3 882 aaKnown RBP12.05□□□□□ -0.48
CHD4-211ENST00000544484 SLC35F2Q8IXU6 374 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 HORMAD2Q8N7B1 307 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 WFDC5Q8TCV5 224 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 POTEKPQ9BYX7 375 aa12.05□□□□□ -0.48
CHD4-211ENST00000544484 TAF1P21675 1872 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms