RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 DEFB110Q30KQ9 67 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 ZNF730Q6ZMV8 503 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 USP30Q70CQ3 517 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 MFSD9Q8NBP5 474 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 OR8J1Q8NGP2 316 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 ZFAND1Q8TCF1 268 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 GPR151Q8TDV0 419 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 TM9SF4Q92544 642 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 SAP130Q9H0E3 1048 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
DDX55-209ENST00000542286 SH3D21A4FU49 640 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 ARRDC5A6NEK1 342 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 CCDC182A6NF36 153 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 NR2F6P10588 404 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 ERP29P30040 261 aaKnown RBP13.79□□□□□ -0.2
DDX55-209ENST00000542286 CSTF2P33240 577 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX55-209ENST00000542286 MPIP34949 423 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 SNRPGP62308 76 aaKnown RBP13.79□□□□□ -0.2
DDX55-209ENST00000542286 EFR3AQ14156 821 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 GPR18Q14330 331 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 IDO2Q6ZQW0 420 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 PAQR7Q86WK9 346 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 NRMQ8IXM6 262 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 OR4F15Q8NGB8 312 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 DEDD2Q8WXF8 326 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 PRRC1Q96M27 445 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 DCLRE1CQ96SD1 692 aaKnown RBP13.79□□□□□ -0.2
DDX55-209ENST00000542286 RACGAP1Q9H0H5 632 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 NARFLQ9H6Q4 476 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 SMURF1Q9HCE7 757 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 EVA1BQ9NVM1 165 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 CNOT2Q9NZN8 540 aaKnown RBP13.79□□□□□ -0.2
DDX55-209ENST00000542286 ZNF780BQ9Y6R6 833 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 EMC8O43402 210 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 ALPPP05187 535 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 CPN2P22792 545 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 CRYBB2P43320 205 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 MLC1Q15049 377 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 MAPK14Q16539 360 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 DUSP5Q16690 384 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 ENTPD8Q5MY95 495 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 C22orf42Q6IC83 251 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 LAX1Q8IWV1 398 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 NLGN4YQ8NFZ3 816 aaPredicted RBP13.79□□□□□ -0.2
DDX55-209ENST00000542286 BBS10Q8TAM1 723 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 ADAMTS15Q8TE58 950 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 CRELD1Q96HD1 420 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 C10orf90Q96M02 699 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 MAT2BQ9NZL9 334 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 CLEC1BQ9P126 229 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 SPIN1Q9Y657 262 aaPredicted RBP13.79□□□□□ -0.2
DDX55-209ENST00000542286 V9GYH0 126 aa13.79□□□□□ -0.2
DDX55-209ENST00000542286 A0A075B6Q4 140 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 LRRC72A6NJI9 287 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 DVL2O14641 736 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 MYL12BO14950 172 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 ARHGEF9O43307 516 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 NOS1APO75052 506 aaPredicted RBP13.78□□□□□ -0.2
DDX55-209ENST00000542286 TMCC2O75069 709 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 MYL9P24844 172 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 UQCRC1P31930 480 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 PRR5P85299 388 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 CSTF1Q05048 431 aaKnown RBP13.78□□□□□ -0.2
DDX55-209ENST00000542286 EXOSC7Q15024 291 aaKnown RBP13.78□□□□□ -0.2
DDX55-209ENST00000542286 ZNF79Q15937 498 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 TMPRSS11AQ6ZMR5 421 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 ASPGQ86U10 573 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 TTLQ8NG68 377 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 OR52P1PQ8NH57 321 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 SMAP2Q8WU79 429 aaPredicted RBP13.78□□□□□ -0.2
DDX55-209ENST00000542286 OMA1Q96E52 524 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 MRGPRX1Q96LB2 322 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 C3orf14Q9HBI5 128 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 TEKT2Q9UIF3 430 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 CSNK1G3Q9Y6M4 447 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 ALPK2Q86TB3 2170 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 PEX12O00623 359 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 CDC42EP2O14613 210 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 AKR7A2O43488 359 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 LALBAP00709 142 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 CSF2P04141 144 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 SCG5P05408 212 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 CTHP32929 405 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 AHRP35869 848 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 RGS8P57771 180 aaPredicted RBP13.78□□□□□ -0.2
DDX55-209ENST00000542286 SNRPD2P62316 118 aaKnown RBP13.78□□□□□ -0.2
DDX55-209ENST00000542286 TRA2BP62995 288 aaKnown RBP13.78□□□□□ -0.2
DDX55-209ENST00000542286 BNC1Q01954 994 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 C1orf61Q13536 156 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 FCRLBQ6BAA4 426 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 C1orf94Q6P1W5 598 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 FIGNL1Q6PIW4 674 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 OR4Q3Q8NH05 313 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 ASB15Q8WXK1 588 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 RNF31Q96EP0 1072 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 SLC22A4Q9H015 551 aa13.78□□□□□ -0.2
DDX55-209ENST00000542286 ENKD1Q9H0I2 346 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms