RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 IGSF6O95976 241 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 LRG1P02750 347 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 WNT1P04628 370 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 CLTBP09497 229 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 CXCL2P19875 107 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 RBMS1P29558 406 aaKnown RBP13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 PBLDP30039 288 aaPredicted RBP13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 LILRA6Q6PI73 481 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 Q6ZTK2 550 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 RASSF6Q6ZTQ3 369 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 TPRG1Q6ZUI0 275 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 PRICKLE2Q7Z3G6 844 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 LINC00518Q8N0U6 118 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 OR2AP1Q8NGE2 309 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 TRMT10AQ8TBZ6 339 aaKnown RBP13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 YIPF5Q969M3 257 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 ERMAPQ96PL5 475 aaPredicted RBP13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 TREX2Q9BQ50 279 aaPredicted RBP13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 DDX31Q9H8H2 851 aaKnown RBP13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 IFT46Q9NQC8 304 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 TNFRSF10DQ9UBN6 386 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 MYO7AQ13402 2215 aa13.91□□□□□ -0.18
AC005840.4-201ENST00000541242 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 A0A1B0GVI7 797 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 SLC9B1P1A6NJY1 282 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 CASC3O15234 703 aaKnown RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 RNF13O43567 381 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 GATBO75879 557 aaKnown RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 UBXN7O94888 489 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 EPPINO95925 133 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 LPLP06858 475 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 C8AP07357 584 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 PDHA2P29803 388 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 MANFP55145 182 aaKnown RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 MPP7Q5T2T1 576 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 SHEQ5VZ18 495 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 SFRP4Q6FHJ7 346 aaPredicted RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 C1orf94Q6P1W5 598 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 SMARCD3Q6STE5 483 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 ATRAIDQ6UW56 229 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 ALKAL2Q6UX46 152 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 C6orf120Q7Z4R8 191 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 IZUMO1Q8IYV9 350 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 SIRT6Q8N6T7 355 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 ASZ1Q8WWH4 475 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 ADAMTS14Q8WXS8 1223 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 ACOT12Q8WYK0 555 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 TRIM43Q96BQ3 446 aaPredicted RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 FAM46AQ96IP4 442 aaKnown RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 FCRL4Q96PJ5 515 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 MYNNQ9NPC7 610 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 KLHL1Q9NR64 748 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 CSNK1G3Q9Y6M4 447 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 CHD7Q9P2D1 2997 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 A0A1W2PRQ8 180 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 KDM4EB2RXH2 506 aaPredicted RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 HNRNPCL2B2RXH8 293 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 SOCS6O14544 535 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 CCL16O15467 120 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 FRS3O43559 492 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 MMP20O60882 483 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 LINC00271P0C7V0 271 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 CTSAP10619 480 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 SFXN4Q6P4A7 337 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 C3P1Q6ZMU1 363 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 TMEM25Q86YD3 366 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 POGLUT1Q8NBL1 392 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 OR4D9Q8NGE8 314 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 MOSPD2Q8NHP6 518 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 XAGE5Q8WWM1 108 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 THAP4Q8WY91 577 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 TCEAL4Q96EI5 215 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 ELMOD3Q96FG2 381 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 CRISPLD2Q9H0B8 497 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 QRSL1Q9H0R6 528 aaKnown RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 A4GALTQ9NPC4 353 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 POMT2Q9UKY4 750 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 CBLCQ9ULV8 474 aa13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 MTCL1Q9Y4B5 1905 aaKnown RBP13.9□□□□□ -0.18
AC005840.4-201ENST00000541242 A0A087WUU8 490 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 TSPAN6O43657 245 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 RGS9O75916 674 aaPredicted RBP13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 CXCL14O95715 111 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 GNSP15586 552 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 NPR2P20594 1047 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 XPAP23025 273 aaPredicted RBP13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 SERPINA4P29622 427 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 TRIM23P36406 574 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 TBPL1P62380 186 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 C1orf53Q5VUE5 145 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 ZNF322Q6U7Q0 402 aaPredicted RBP13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 TFAP2EQ6VUC0 442 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 C17orf107Q6ZR85 190 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 SYT9Q86SS6 491 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 OR51G2Q8NGK0 314 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 HMGB4Q8WW32 186 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 KLK6Q92876 244 aa13.89□□□□□ -0.19
AC005840.4-201ENST00000541242 GCDHQ92947 438 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms