RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 EML6Q6ZMW3 1958 aa9.77□□□□□ -0.84
ATL3-204ENST00000540699 RP1L1Q8IWN7 2480 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 OR6C76A6NM76 312 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 M0QX08 132 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 PEX1O43933 1283 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 PRKNO60260 465 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 TPST1O60507 370 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 COQ9O75208 318 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 NME6O75414 186 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 ZFAND5O76080 213 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 ZNF682O95780 498 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 MT-ND1P03886 318 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 MLF1P58340 268 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 SELENOWP63302 87 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 RNF4P78317 190 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 KCNJ10P78508 379 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 TLE1Q04724 770 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 RAPSNQ13702 412 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 ZNF267Q14586 743 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 EXOSC7Q15024 291 aaKnown RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 MEP1AQ16819 746 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 RPS26P11Q5JNZ5 115 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 ACER2Q5QJU3 275 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 B3GNTL1Q67FW5 361 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 HSDL2Q6YN16 418 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 ASB18Q6ZVZ8 466 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 VTCN1Q7Z7D3 282 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 RPS19BP1Q86WX3 136 aaKnown RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 EPHX4Q8IUS5 362 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 CDRT4Q8N9R6 151 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 SLC16A11Q8NCK7 471 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 OR7G1Q8NGA0 311 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 OR52R1Q8NGF1 315 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 BBS10Q8TAM1 723 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 NUBPLQ8TB37 319 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 XAGE5Q8WWM1 108 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 HAS2Q92819 552 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 OTUB1Q96FW1 271 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 SLC35A4Q96G79 324 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 CENPNQ96H22 339 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 HSH2DQ96JZ2 352 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 C7orf34Q96L11 122 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 STACQ99469 402 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 DEFB126Q9BYW3 111 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 PIGUQ9H490 435 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 EQTNQ9NQ60 294 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 DUSP22Q9NRW4 184 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 COPS7AQ9UBW8 275 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 TEKT2Q9UIF3 430 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 GPC6Q9Y625 555 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 USP9YO00507 2555 aaPredicted RBP9.77□□□□□ -0.85
ATL3-204ENST00000540699 DSPPQ9NZW4 1301 aa9.77□□□□□ -0.85
ATL3-204ENST00000540699 SPTAN1Q13813 2472 aaKnown RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 PRAMEF25A6NGN4 478 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 DUXAA6NLW8 204 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 C5orf58C9J3I9 102 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 CLOCKO15516 846 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 MAN1A2O60476 641 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 PDE9AO76083 593 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 MFN2O95140 757 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 AGR2O95994 175 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 LDLRP01130 860 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 IFNA14P01570 189 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 OPN1SWP03999 348 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 ETS2P15036 469 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 CD247P20963 164 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 SSTR4P31391 388 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 TRHRP34981 398 aaPredicted RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 EMDP50402 254 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 CRISP3P54108 245 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 VLDLRP98155 873 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 EBPQ15125 230 aaKnown RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 DUSP5Q16690 384 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 ABHD17BQ5VST6 288 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 AP1ARQ63HQ0 302 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 PIWIL3Q7Z3Z3 882 aaKnown RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 WDR53Q7Z5U6 358 aaPredicted RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 TSEN54Q7Z6J9 526 aaKnown RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 SLC44A2Q8IWA5 706 aaPredicted RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 C9orf40Q8IXQ3 194 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 RBMXL3Q8N7X1 1067 aaKnown RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 ZNF441Q8N8Z8 693 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 CHDHQ8NE62 594 aaPredicted RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 GPR32P1Q8NGA4 272 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 OR5L2Q8NGL0 311 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 OR10Q1Q8NGQ4 319 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 ADAMTS15Q8TE58 950 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 TM9SF4Q92544 642 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 VSTM2LQ96N03 204 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 TRNT1Q96Q11 434 aaKnown RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 TREX2Q9BQ50 279 aaPredicted RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 LMF2Q9BU23 707 aaKnown RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 DOHHQ9BU89 302 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 CNPPD1Q9BV87 410 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 BTBD2Q9BX70 525 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 SEMA6AQ9H2E6 1030 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 SLC38A1Q9H2H9 487 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 YY1AP1Q9H869 796 aa9.76□□□□□ -0.85
ATL3-204ENST00000540699 TRIM45Q9H8W5 580 aaPredicted RBP9.76□□□□□ -0.85
ATL3-204ENST00000540699 NTN4Q9HB63 628 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms