RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 GALNT18Q6P9A2 607 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 TMEM107Q6UX40 140 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 MMGT1Q8N4V1 131 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 AKAP1Q92667 903 aaKnown RBP eCLIP11.19□□□□□ -0.62
COPS7A-211ENST00000540408 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
COPS7A-211ENST00000540408 APIPQ96GX9 242 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF382Q96SR6 550 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 HDHD5Q9BXW7 423 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 EBPLQ9BY08 206 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 ACTR6Q9GZN1 396 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 IQCGQ9H095 443 aaKnown RBP11.19□□□□□ -0.62
COPS7A-211ENST00000540408 GRPEL1Q9HAV7 217 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 CLEC4AQ9UMR7 237 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 VDAC3Q9Y277 283 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 SNX8Q9Y5X2 465 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 FBN3Q75N90 2809 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 A0A087WZY1 265 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 TRIM49D1C9J1S8 452 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 UPK1AO00322 258 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 NDUFB5O43674 189 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 UTS2O95399 124 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 PLAUP00749 431 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 FESP07332 822 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 PABPC4LP0CB38 370 aaKnown RBP11.18□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF17P17021 662 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 ME2P23368 584 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 GABRA3P34903 492 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 PRR5P85299 388 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF763Q0D2J5 394 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF678Q5SXM1 525 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 C8orf74Q6P047 294 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 PODNL1Q6PEZ8 512 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 GGNQ86UU5 652 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 EXOC3L1Q86VI1 746 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 RELL1Q8IUW5 271 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 SLC22A9Q8IVM8 553 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 STEAP2Q8NFT2 490 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 OR10D3Q8NH80 312 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 GTPBP3Q969Y2 492 aaKnown RBP11.18□□□□□ -0.62
COPS7A-211ENST00000540408 REXO5Q96IC2 774 aaKnown RBP11.18□□□□□ -0.62
COPS7A-211ENST00000540408 LMF2Q9BU23 707 aaKnown RBP11.18□□□□□ -0.62
COPS7A-211ENST00000540408 FUT8Q9BYC5 575 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 ESRP2Q9H6T0 727 aaKnown RBP11.18□□□□□ -0.62
COPS7A-211ENST00000540408 ZDHHC18Q9NUE0 388 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 TAS2R7Q9NYW3 318 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 FLRT3Q9NZU0 649 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF180Q9UJW8 692 aa11.18□□□□□ -0.62
COPS7A-211ENST00000540408 WBP11Q9Y2W2 641 aaKnown RBP11.18□□□□□ -0.62
COPS7A-211ENST00000540408 CSPG4Q6UVK1 2322 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 IGLV3-32A0A0A0MS00 114 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 RNF223E7ERA6 249 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 ENO1P06733 434 aaKnown RBP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 TUBBP07437 444 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 SNRPAP09012 282 aaKnown RBP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 SBK3P0C264 359 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 CTAGE8P0CG41 777 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 NID1P14543 1247 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 HPGDP15428 266 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 PSMB1P20618 241 aaKnown RBP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 IMPDH1P20839 514 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 SLC6A8P48029 635 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 PKNOX1P55347 436 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 RAC1P63000 192 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 IMPG1Q17R60 797 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 TMEM44Q2T9K0 475 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 CTU2Q2VPK5 515 aaKnown RBP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 VPS26BQ4G0F5 336 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 UNC50Q53HI1 259 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 TMEM201Q5SNT2 666 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 CPTPQ5TA50 214 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 HMBOX1Q6NT76 420 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 ESPNLQ6ZVH7 1005 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 LCA5Q86VQ0 697 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 CTAGE4Q8IX94 777 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 OR2L13Q8N349 312 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 TMEM151AQ8N4L1 468 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 GPR151Q8TDV0 419 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 FBXW5Q969U6 566 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 ZBTB8AQ96BR9 441 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 ELP4Q96EB1 424 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 TMEM204Q9BSN7 226 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 REG4Q9BYZ8 158 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 RTN4RQ9BZR6 473 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 CDC42EP4Q9H3Q1 356 aaKnown RBP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 GLIPR2Q9H4G4 154 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 TIGARQ9NQ88 270 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 SIRT5Q9NXA8 310 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 TIMM22Q9Y584 194 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 HEATR5AQ86XA9 2040 aa11.17□□□□□ -0.62
COPS7A-211ENST00000540408 RAI1Q7Z5J4 1906 aaPredicted RBP11.17□□□□□ -0.62
COPS7A-211ENST00000540408 DNHD1Q96M86 4753 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 SERTM1A2A2V5 107 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 RNF212BA8MTL3 300 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 SHISA8B8ZZ34 492 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 ADAMDEC1O15204 470 aa11.16□□□□□ -0.62
COPS7A-211ENST00000540408 CLOCKO15516 846 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms