RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 NDC1Q9BTX1 674 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 BRINP2Q9C0B6 783 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 POLR2J3Q9H1A7 115 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 KCNH6Q9H252 994 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SLCO5A1Q9H2Y9 848 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 METTL17Q9H7H0 456 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GORASP2Q9H8Y8 452 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CERS4Q9HA82 394 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GPRC5BQ9NZH0 403 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 C2orf92A0A1B0GVN3 265 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 WASH3PC4AMC7 463 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 NPIPA2E9PIF3 369 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 NPIPA5E9PKD4 350 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 NPIPA3F8WFD2 350 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 FAAHO00519 579 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 FLRT2O43155 660 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 LILRB3O75022 631 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SCGB1D2O95969 90 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CCL23P55773 120 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 VEZF1Q14119 521 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CARD16Q5EG05 197 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 C3orf38Q5JPI3 329 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TMEM81Q6P7N7 255 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TTLL10Q6ZVT0 673 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TAS1R1Q7RTX1 841 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 DEFB128Q7Z7B8 93 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 NRROSQ86YC3 692 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 BEST3Q8N1M1 668 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ZBTB2Q8N680 514 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 FCAMRQ8WWV6 532 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 MOAP1Q96BY2 351 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SYT4Q9H2B2 425 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TMPRSS5Q9H3S3 457 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PLCXD1Q9NUJ7 323 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ZDHHC3Q9NYG2 299 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 FKBPLQ9UIM3 349 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 FBXL4Q9UKA2 621 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 MRTO4Q9UKD2 239 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 NPIPA1Q9UND3 350 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 RPH3ALQ9UNE2 315 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 INSL6Q9Y581 213 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 MAGEB4O15481 346 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 KLKB1P03952 638 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 NME1P15531 152 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF250P15622 560 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ACVR2AP27037 513 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PBLDP30039 288 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CASP9P55211 416 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CARD18P57730 90 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 WDR5P61964 334 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 RCAN2Q14206 197 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ADAM5Q6NVV9 412 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CNIH2Q6PI25 160 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ENPP7Q6UWV6 458 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TP53I13Q8NBR0 393 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PROKR2Q8NFJ6 384 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 OR2L5Q8NG80 312 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 OR10Z1Q8NGY1 313 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GIMAP1Q8WWP7 306 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PPP1R14AQ96A00 147 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PIGQQ9BRB3 760 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 MFFQ9GZY8 342 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 C11orf54Q9H0W9 315 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CDCP1Q9H5V8 836 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 IL21Q9HBE4 155 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 MIOXQ9UGB7 285 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SLC23A1Q9UHI7 598 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PCTPQ9UKL6 214 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ACAD8Q9UKU7 415 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 WASF3Q9UPY6 502 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 A8MVJ9 347 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 BHLHE40O14503 412 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SCO2O43819 266 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CDK14O94921 469 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PRAMEF12O95522 483 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 EPORP19235 508 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CRHBPP24387 322 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GABRR2P28476 465 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 RBMS1P29558 406 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SHMT2P34897 504 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 HCCSP53701 268 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 IRF8Q02556 426 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SPHARQ15513 63 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ADPRMQ3LIE5 342 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 XKR7Q5GH72 579 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PLEKHS1Q5SXH7 462 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF680Q8NEM1 530 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 OR52E4Q8NGH9 312 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CD200R1Q8TD46 325 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 FUBP1Q96AE4 644 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TMEM41AQ96HV5 264 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SCLYQ96I15 445 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 VN1R3Q9BXE9 311 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 HIPK2Q9H2X6 1198 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PLXNA4Q9HCM2 1894 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 CPED1A4D0V7 1026 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 AIPO00170 330 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 ENSAO43768 121 aaKnown RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 GADD45GO95257 159 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 ALPLP05186 524 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms