RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TBXA2RP21731 343 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 MATN1P21941 496 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 ACVR2AP27037 513 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 CDKN2CP42773 168 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 AQP5P55064 265 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 WLSQ5T9L3 541 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 VASNQ6EMK4 673 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 RPTNQ6XPR3 784 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 ZNF808Q8N4W9 903 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 OR9I1Q8NGQ6 314 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 GOT1L1Q8NHS2 421 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 OR52E6Q96RD3 313 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 UGT2B28Q9BY64 529 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 TCF7L2Q9NQB0 619 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 ALKBH4Q9NXW9 302 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 BTNL2Q9UIR0 455 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 PCNX3Q9H6A9 2034 aa16.63■□□□□ 0.25
SNRPA1-203ENST00000540017 KDM4EB2RXH2 506 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 SLC22A3O75751 556 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 ANGPTL1O95841 491 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 NGFRP08138 427 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 UQCRC2P22695 453 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 TCEA1P23193 301 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 SRD5A2P31213 254 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 NUP107P57740 925 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 GSTA3Q16772 222 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 NHSL2Q5HYW2 709 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 DCST2Q5T1A1 773 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 ACAD11Q709F0 780 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 ULK2Q8IYT8 1036 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 GATSQ8NAP1 163 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 VPS37AQ8NEZ2 397 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 OR14L1PQ8NHC6 308 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 THOC1Q96FV9 657 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 SLC35G5Q96KT7 338 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 ZBTB18Q99592 522 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 TBL1XR1Q9BZK7 514 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 ACBD3Q9H3P7 528 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 TAS2R10Q9NYW0 307 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 ZIM2Q9NZV7 527 aa16.62■□□□□ 0.25
SNRPA1-203ENST00000540017 NPIPA5A0A0B4J1W7 369 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 FIGNL2A6NMB9 653 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 ALG1L2C9J202 215 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 NPIPA7E9PJI5 369 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 KRT16P08779 473 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 NPIPA8P0DM63 369 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 DPP4P27487 766 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 CLK3P49761 638 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 GFRA1P56159 465 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 PMPCAQ10713 525 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 SAXO2Q658L1 398 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 BHLHB9Q6PI77 547 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 XKRXQ6PP77 449 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 OLIG3Q7RTU3 272 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 EID3Q8N140 333 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 GLB1L3Q8NCI6 653 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 OR4K17Q8NGC6 315 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 MIPOL1Q8TD10 442 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 ABTB1Q969K4 478 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 WDYHV1Q96HA8 205 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 KLHDC3Q9BQ90 382 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 SLC35A5Q9BS91 424 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 TTYH2Q9BSA4 534 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 G6PC3Q9BUM1 346 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 OR51I1Q9H343 314 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 SDHAF3Q9NRP4 125 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 UBQLN4Q9NRR5 601 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 SLC6A13Q9NSD5 602 aa16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 RPH3AQ9Y2J0 694 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 MRPS18CQ9Y3D5 142 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-203ENST00000540017 PHF3Q92576 2039 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 IGLV3-32A0A0A0MS00 114 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 CCDC154A6NI56 674 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 POLR3GO15318 223 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 GMFGO60234 142 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 EDF1O60869 148 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 WDR1O75083 606 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 GSNP06396 782 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 GLI4P10075 376 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 GRNP28799 593 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 LCN1P31025 176 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 RNF144AP50876 292 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 SMSP52788 366 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 DSCR4P56555 118 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 B3GALT5-AS1P59052 145 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 C17orf67Q0P5P2 114 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 CD226Q15762 336 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 C1orf185Q5T7R7 199 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 TMEM211Q6ICI0 200 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 SEM1Q6ZVN7 128 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 MIER2Q8N344 545 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 CHDHQ8NE62 594 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 RAB8BQ92930 207 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 NEURL3Q96EH8 262 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 PANX1Q96RD7 426 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 SDF2Q99470 211 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 CCDC28BQ9BUN5 200 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 PRDM14Q9GZV8 571 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 DKKL1Q9UK85 242 aa16.6■□□□□ 0.25
SNRPA1-203ENST00000540017 PCDHGB3Q9Y5G1 929 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms