RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 IL7RP16871 459 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 ACVR2AP27037 513 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 AQP1P29972 269 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 PPP2R1BP30154 601 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 MAP3K8P41279 467 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 HTR3AP46098 478 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 E2F1Q01094 437 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 IFITM3Q01628 133 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 NHLH1Q02575 133 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 CD47Q08722 323 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 MGAT2Q10469 447 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 TRA2AQ13595 282 aaKnown RBP eCLIP8.24□□□□□ -1.09
DDB1-213ENST00000539332 DNASE1L3Q13609 305 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 SF3B4Q15427 424 aaKnown RBP eCLIP8.24□□□□□ -1.096e-8■■■■□ 19.8
DDB1-213ENST00000539332 TRIP6Q15654 476 aaKnown RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 ZIK1Q3SY52 487 aaPredicted RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 IFI44LQ53G44 452 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 C6orf183Q5T699 404 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 HEPHL1Q6MZM0 1159 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 CDC73Q6P1J9 531 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 SHQ1Q6PI26 577 aaKnown RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 BTLAQ7Z6A9 289 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 TMEM179BQ7Z7N9 219 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 GLRX5Q86SX6 157 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 LYSMD2Q8IV50 215 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 GPR135Q8IZ08 494 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 SHISA5Q8N114 240 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 TTC29Q8NA56 475 aaPredicted RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 NUP43Q8NFH3 380 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 OR10Q1Q8NGQ4 319 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 BBS10Q8TAM1 723 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 FAR1Q8WVX9 515 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 IPCEF1Q8WWN9 437 aaPredicted RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 GEMIN6Q8WXD5 167 aaKnown RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 RAB8BQ92930 207 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 MVB12AQ96EY5 273 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 OR7D2Q96RA2 312 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 MBOAT4Q96T53 435 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 TREX2Q9BQ50 279 aaPredicted RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 BTBD2Q9BX70 525 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 ACTRT3Q9BYD9 372 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 SOX17Q9H6I2 414 aaPredicted RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 SIDT1Q9NXL6 827 aaKnown RBP8.24□□□□□ -1.09
DDB1-213ENST00000539332 SERTAD3Q9UJW9 196 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 OSGIN1Q9UJX0 560 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 POU2F3Q9UKI9 436 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 CARD8Q9Y2G2 431 aa8.24□□□□□ -1.09
DDB1-213ENST00000539332 A0A0A6YYC8 382 aaPredicted RBP8.23□□□□□ -1.09
DDB1-213ENST00000539332 PNMA8CA0A1B0GUJ8 204 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 FAM227AF5H4B4 570 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 TGFBR3LH3BV60 316 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 I3L1I5 382 aaPredicted RBP8.23□□□□□ -1.09
DDB1-213ENST00000539332 GNGT2O14610 69 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 IDH3BO43837 385 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 INMTO95050 263 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 CHRM4P08173 479 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 SLC35E2P0CK97 266 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 FPR1P21462 350 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 TCEA1P23193 301 aaKnown RBP8.23□□□□□ -1.09
DDB1-213ENST00000539332 CSTF2P33240 577 aaKnown RBP eCLIP8.23□□□□□ -1.09
DDB1-213ENST00000539332 PTGER1P34995 402 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 CASP3P42574 277 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 LIMK1P53667 647 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 IST1P53990 364 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 ISL1P61371 349 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 ACY1Q03154 408 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 PRKCDQ05655 676 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 KEAP1Q14145 624 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 LASP1Q14847 261 aaKnown RBP8.23□□□□□ -1.09
DDB1-213ENST00000539332 SYPL1Q16563 259 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 MEP1AQ16819 746 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 PRICKLE4Q2TBC4 344 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 FAM214AQ32MH5 1076 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 YOD1Q5VVQ6 348 aaPredicted RBP8.23□□□□□ -1.09
DDB1-213ENST00000539332 MFSD12Q6NUT3 480 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 ZNF544Q6NX49 715 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 ZNF605Q86T29 641 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 ZNF595Q8IYB9 648 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 ARL6IP6Q8N6S5 226 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 AMER2Q8N7J2 671 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 OR7G1Q8NGA0 311 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 GPR32P1Q8NGA4 272 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 OR5D16Q8NGK9 328 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 MCFD2Q8NI22 146 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 GRPEL2Q8TAA5 225 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 CAPSLQ8WWF8 208 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 PROX1Q92786 737 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 KAT2AQ92830 837 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 CRELD1Q96HD1 420 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 OR6C1Q96RD1 312 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 APOL4Q9BPW4 351 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 CCDC90BQ9GZT6 254 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 DUSP21Q9H596 190 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 NEK6Q9HC98 313 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 MAT2BQ9NZL9 334 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 NDUFAF4Q9P032 175 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 SATB2Q9UPW6 733 aa8.23□□□□□ -1.09
DDB1-213ENST00000539332 LIPT1Q9Y234 373 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms