RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DRD5P21918 477 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 PCBP4P57723 403 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 RPS7P62081 194 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 MLLT1Q03111 559 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 KLF9Q13886 244 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 FAM27D1Q5T7N8 215 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 SHEQ5VZ18 495 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 UBE2E3Q969T4 207 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 TIFAQ96CG3 184 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 FAM46AQ96IP4 442 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ART5Q96L15 291 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 CXorf58Q96LI9 332 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 SARGQ9BW04 601 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ABCG4Q9H172 646 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 OR51I1Q9H343 314 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 TRIM36Q9NQ86 728 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 AHSPQ9NZD4 102 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 H2AFY2Q9P0M6 372 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ENTPD4Q9Y227 616 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 PLSCR5A0PG75 271 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 RFXAPO00287 272 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 RGS11O94810 467 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 TFP02787 698 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 WNT1P04628 370 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ALDOBP05062 364 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 CD53P19397 219 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 CTSCP53634 463 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 LMAN2Q12907 356 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 CPXM2Q8N436 756 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ACBD7Q8N6N7 88 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ZNF740Q8NDX6 193 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 OR5D16Q8NGK9 328 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 BBS10Q8TAM1 723 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ELMOD3Q96FG2 381 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 LCORQ96JN0 433 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 CAMK1GQ96NX5 476 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 HMX1Q9NP08 348 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 PFDN2Q9UHV9 154 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ING1Q9UK53 422 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 PCP4L1A6NKN8 68 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 L7N2F9 121 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 GREM1O60565 184 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 ADAMTS4O75173 837 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 C1orf105O95561 183 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 URODP06132 367 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 RB1P06400 928 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 CXCL2P19875 107 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 SDHBP21912 280 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 PDHA2P29803 388 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 BUD31P41223 144 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 FRKP42685 505 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 TAS2R41P59536 307 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 SLC25A35Q3KQZ1 300 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 OR51G2Q8NGK0 314 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 OR51Q1Q8NH59 317 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 ALG8Q9BVK2 526 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 SLC6A15Q9H2J7 730 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 ZDHHC6Q9H6R6 413 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 KCNK12Q9HB15 430 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 MRPS7Q9Y2R9 242 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 CHST2Q9Y4C5 530 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 BACE2Q9Y5Z0 518 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 PI15O43692 258 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 OMPP47874 163 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 TLE2Q04725 743 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 ELAVL2Q12926 359 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 NOGQ13253 232 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 TRAM1Q15629 374 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 PGGHGQ32M88 737 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 RRM2BQ7LG56 351 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 TM4SF18Q96CE8 201 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 SLC35G5Q96KT7 338 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 PELOQ9BRX2 385 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 BCL2L10Q9HD36 194 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 IL20Q9NYY1 176 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 ZNF175Q9Y473 711 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 NPFFR2Q9Y5X5 522 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 ANAPC1Q9H1A4 1944 aa17.38■□□□□ 0.37
SFSWAP-207ENST00000538548 OR6C65A6NJZ3 312 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 SOCS6O14544 535 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 PGRMC2O15173 223 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 GSTZ1O43708 216 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 EIF2B5Q13144 721 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 PLD1Q13393 1074 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 TRAM2Q15035 370 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 STK11Q15831 433 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 RASGEF1AQ8N9B8 481 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 OR5W2Q8NH69 310 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 PIGXQ8TBF5 258 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 ZNF416Q9BWM5 594 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 CPEB1Q9BZB8 566 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 WDR26Q9H7D7 661 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 NPDC1Q9NQX5 325 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 TDP1Q9NUW8 608 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 NKIRAS2Q9NYR9 191 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 C5AR2Q9P296 337 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 TRPC4Q9UBN4 977 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 CLEC4EQ9ULY5 219 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 PLPP1O14494 284 aa17.37■□□□□ 0.37
SFSWAP-207ENST00000538548 NUPL2O15504 423 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms