RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CD3GP09693 182 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 GGT1P19440 569 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 F8A1P23610 371 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 VAMP1P23763 118 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 IVDP26440 423 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 AHRP35869 848 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PSMD7P51665 324 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CRISP1P54107 249 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PPP2CBP62714 309 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PPP2CAP67775 309 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TAP2Q03519 686 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 POU4F2Q12837 409 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF423Q2M1K9 1284 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 DEFB109BQ30KR1 87 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CDKL4Q5MAI5 379 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ARHGAP22Q7Z5H3 698 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CEACAM19Q7Z692 300 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SLITRK4Q8IW52 837 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZFP41Q8N8Y5 198 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SDR9C7Q8NEX9 313 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZC3HAV1LQ96H79 300 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 PLA2G2FQ9BZM2 168 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CMAHPQ9Y471 501 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 POM121BA6NF01 834 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TMEM202A6NGA9 273 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PPP6CO00743 305 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 GPR75O95800 540 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 FUT1P19526 365 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 DCDC1P59894 354 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ST3GAL4Q11206 333 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ADAM15Q13444 863 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PIN1Q13526 163 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 LTB4RQ15722 352 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TNFAIP8L3Q5GJ75 292 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CWF19L1Q69YN2 538 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 TMEM64Q6YI46 380 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 OR2T4Q8NH00 348 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CCDC107Q8WV48 283 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 FAM71F1Q96KD3 344 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 LRR1Q96L50 414 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SLC30A3Q99726 388 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 DNTTIP1Q9H147 329 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 DCSTAMPQ9H295 470 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CALHM2Q9HA72 323 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 C1GALT1Q9NS00 363 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ADAMTSL1Q8N6G6 1762 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SAGE2PA6NJ88 616 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 FAM189A1O60320 539 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CNOT4O95628 575 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 IL9P15248 144 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CELP19835 753 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SLC2A5P22732 501 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TNFSF4P23510 183 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 KIAA1024LP59773 190 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ACTC1P68032 377 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ACTA1P68133 377 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 HNRNPA0Q13151 305 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 PLGLAQ15195 96 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 C18orf63Q68DL7 685 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ZNF534Q76KX8 674 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RAB11FIP2Q7L804 512 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 HS3ST5Q8IZT8 346 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 OR9Q2Q8NGE9 314 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ZNF675Q8TD23 568 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RAB2BQ8WUD1 216 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 NTMT1Q9BV86 223 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ATP13A2Q9NQ11 1180 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 BTNL2Q9UIR0 455 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CARD8Q9Y2G2 431 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 UBR3Q6ZT12 1888 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 C2orf72A6NCS6 295 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 DISC1C4P0D8 188 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TEX46H3BTG2 121 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RPS17P08708 135 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 IMPA1P29218 277 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 THBS2P35442 1172 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SQSTM1Q13501 440 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PAGE3Q5JUK9 113 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 C3orf33Q6P1S2 294 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 MSANTD1Q6ZTZ1 278 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TMPRSS12Q86WS5 348 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SLC35F2Q8IXU6 374 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TEX26Q8N6G2 289 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SLC45A3Q96JT2 553 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 FGF22Q9HCT0 170 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 RIMS3Q9UJD0 308 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 ICKQ9UPZ9 632 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 TMEM14AQ9Y6G1 99 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CDH10Q9Y6N8 788 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CHP2O43745 196 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 DDAH2O95865 285 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 EDN3P14138 238 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PYCR1P32322 319 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SOX3P41225 446 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 PRPS1P60891 318 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 AWAT2Q6E213 333 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 CCSAPQ6IQ19 270 aaPredicted RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 METTL2BQ6P1Q9 378 aaKnown RBP5.03□□□□□ -1.6
LRP6-203ENST00000538239 CHCHD4Q8N4Q1 142 aa5.03□□□□□ -1.6
LRP6-203ENST00000538239 SIRT6Q8N6T7 355 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms