RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MARVELD2Q8N4S9 558 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 ZNF808Q8N4W9 903 aaPredicted RBP18.6■□□□□ 0.57
CCS-208ENST00000533244 OR2M3Q8NG83 312 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 OR5D16Q8NGK9 328 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 OR5M9Q8NGP3 310 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 SLC35G5Q96KT7 338 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 OR52E6Q96RD3 313 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 SDHAF3Q9NRP4 125 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 PPP4R1LQ9P1A2 415 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 ACAD8Q9UKU7 415 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 FIGNL2A6NMB9 653 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 WDR1O75083 606 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 AGAP20933 346 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 MATN1P21941 496 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 CLK3P49761 638 aaKnown RBP18.59■□□□□ 0.57
CCS-208ENST00000533244 RPS26P62854 115 aaKnown RBP18.59■□□□□ 0.57
CCS-208ENST00000533244 DCST2Q5T1A1 773 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 MAMDC2Q7Z304 686 aaPredicted RBP18.59■□□□□ 0.57
CCS-208ENST00000533244 YRDCQ86U90 279 aaKnown RBP18.59■□□□□ 0.57
CCS-208ENST00000533244 MARCH3Q86UD3 253 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 MIER2Q8N344 545 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 RPRMLQ8N4K4 120 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 CHDHQ8NE62 594 aaPredicted RBP18.59■□□□□ 0.57
CCS-208ENST00000533244 OR9I1Q8NGQ6 314 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 NEURL3Q96EH8 262 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 DTNBP1Q96EV8 351 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 CHMP6Q96FZ7 201 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 TIMP4Q99727 224 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 TBL1XR1Q9BZK7 514 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 UBQLN4Q9NRR5 601 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 PLEKHB1Q9UF11 243 aaPredicted RBP18.59■□□□□ 0.57
CCS-208ENST00000533244 SLC6A5Q9Y345 797 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 FAM215AQ9Y5M1 114 aa18.59■□□□□ 0.57
CCS-208ENST00000533244 PHF3Q92576 2039 aaKnown RBP18.59■□□□□ 0.57
CCS-208ENST00000533244 C15orf38-AP3S2A0A0A6YYH1 394 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 DUXAA6NLW8 204 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 ANGPTL1O95841 491 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 GP1BBP13224 206 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 ACVR2AP27037 513 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 CDKN2CP42773 168 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 TOMM20Q15388 145 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 RTL6Q6ICC9 239 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 MSANTD1Q6ZTZ1 278 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 MRGPRGQ86SM5 289 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 PANX1Q96RD7 426 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 INPP5KQ9BT40 448 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 UGT2B28Q9BY64 529 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 PRDM14Q9GZV8 571 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 MED4Q9NPJ6 270 aa18.58■□□□□ 0.57
CCS-208ENST00000533244 A0A1W2PQD3 144 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 A1L4Q6 167 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 NPIPB9F8W1W9 429 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 ATP8B1O43520 1251 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 ZIC3O60481 467 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 BMP7P18075 431 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 SMSP52788 366 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 GFRA1P56159 465 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 DSCR4P56555 118 aaPredicted RBP18.57■□□□□ 0.56
CCS-208ENST00000533244 C17orf67Q0P5P2 114 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 DCST1Q5T197 706 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 ZNF585AQ6P3V2 769 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 XKRXQ6PP77 449 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 ARFGAP2Q8N6H7 521 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 OR4K17Q8NGC6 315 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 DUSP19Q8WTR2 217 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 SLC35A5Q9BS91 424 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 DSN1Q9H410 356 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 TAS2R10Q9NYW0 307 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 MED12Q93074 2177 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 FAM234BA2RU67 622 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 CCDC154A6NI56 674 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 ACTL6AO96019 429 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 AK1P00568 194 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 C1QCP02747 245 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 HOXD4P09016 255 aaPredicted RBP18.57■□□□□ 0.56
CCS-208ENST00000533244 GABRA1P14867 456 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 DPP4P27487 766 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 POLR2JP52435 117 aaKnown RBP18.57■□□□□ 0.56
CCS-208ENST00000533244 IRX1P78414 480 aaPredicted RBP18.57■□□□□ 0.56
CCS-208ENST00000533244 STX5Q13190 355 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 GANABQ14697 944 aaKnown RBP18.57■□□□□ 0.56
CCS-208ENST00000533244 TMEM211Q6ICI0 200 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 HEPHL1Q6MZM0 1159 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 ULK2Q8IYT8 1036 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 TRIML2Q8N7C3 387 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 OR14L1PQ8NHC6 308 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 SDF2Q99470 211 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 OR51I1Q9H343 314 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 HHATLQ9HCP6 504 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 MED11Q9P086 117 aa18.57■□□□□ 0.56
CCS-208ENST00000533244 ATP6V1C1P21283 382 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 PTGER4P35408 488 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 ATP4BP51164 291 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 B3GALT5-AS1P59052 145 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 STX1BP61266 288 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 ART3Q13508 389 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 ARHGAP11BQ3KRB8 267 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 HSP90B2PQ58FF3 399 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 C1orf185Q5T7R7 199 aa18.56■□□□□ 0.56
CCS-208ENST00000533244 AP1ARQ63HQ0 302 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms