RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 TMEM225Q6GV28 225 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 ZC3H14Q6PJT7 736 aaKnown RBP14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 TMEM17Q86X19 198 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 MCATQ8IVS2 390 aaKnown RBP14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 TMEM151BQ8IW70 566 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 OR6Q1Q8NGQ2 317 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 FCAMRQ8WWV6 532 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 OR52D1Q9H346 318 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 POT1Q9NUX5 634 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 NDUFAF4Q9P032 175 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 USP36Q9P275 1121 aaKnown RBP14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 K7ESM1 405 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 TP53I11O14683 189 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 LEG1Q6P5S2 330 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 ASB16Q96NS5 453 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 OR4K3Q96R72 315 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 STARD5Q9NSY2 213 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 WDR37Q9Y2I8 494 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 CROCCQ5TZA2 2017 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 CD97P48960 835 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 YPEL5P62699 121 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 CSNK1G2P78368 415 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 GAB1Q13480 694 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 EXOSC7Q15024 291 aaKnown RBP14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 GPAT4Q86UL3 456 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF683Q8IZ20 524 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 SYT14Q8NB59 555 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 TMEM163Q8TC26 289 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 ITPKCQ96DU7 683 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 C1QTNF2Q9BXJ5 285 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 CST11Q9H112 138 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF224Q9NZL3 707 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 PSORS1C1Q9UIG5 152 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 CD207Q9UJ71 328 aa14.39□□□□□ -0.11
PCDHA3-202ENST00000532566 GFRA2O00451 464 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 FMO6PO60774 539 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 NUDT1P36639 197 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 CASRP41180 1078 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 TMEM69Q5SWH9 247 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 PRAMEF17Q5VTA0 474 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 C1orf189Q5VU69 101 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 XKRXQ6PP77 449 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 BAIAP2L2Q6UXY1 529 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 DCDC5Q6ZRR9 648 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 MAMDC2Q7Z304 686 aaPredicted RBP14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 DTX3Q8N9I9 347 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 VN1R2Q8NFZ6 395 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 PNPLA2Q96AD5 504 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 BTBD2Q9BX70 525 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF385DQ9H6B1 395 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 TM7SF3Q9NS93 570 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 UCKL1Q9NWZ5 548 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF639Q9UID6 485 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF443Q9Y2A4 671 aaPredicted RBP14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 SLC9B1P1A6NJY1 282 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 H0YGG7 62 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 PLPP1O14494 284 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 IFNA7P01567 189 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 ARF3P61204 181 aaPredicted RBP14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 TSPAN31Q12999 210 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 SNTA1Q13424 505 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 PGGHGQ32M88 737 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 METRNLQ641Q3 311 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 KDM4DQ6B0I6 523 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 LRRN1Q6UXK5 716 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF431Q8TF32 576 aaPredicted RBP14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 AKAP1Q92667 903 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 C16orf58Q96GQ5 468 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 HIST1H2AAQ96QV6 131 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 GLIPR2Q9H4G4 154 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 THSD1Q9NS62 852 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 SUSD2Q9UGT4 822 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 A0A0X1KG70 313 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 FCER2P06734 321 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 GSTT2P0CG29 244 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 PRPS1P60891 318 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 SNTB2Q13425 540 aaKnown RBP14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 CCSAPQ6IQ19 270 aaPredicted RBP14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 OR52R1Q8NGF1 315 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 ZDHHC5Q9C0B5 715 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 TMEM168Q9H0V1 697 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 ERVK-19Q9WJR5 959 aa14.38□□□□□ -0.11
PCDHA3-202ENST00000532566 OR14I1A6ND48 311 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 PRRT4C9JH25 899 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 RBBP9O75884 186 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 FUT1P19526 365 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 MLLT11Q13015 90 aaPredicted RBP14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 TMED4Q7Z7H5 227 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 AMDHD1Q96NU7 426 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 DDX31Q9H8H2 851 aaKnown RBP14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 LMAN1LQ9HAT1 526 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 KCMF1Q9P0J7 381 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 CXXC1Q9P0U4 656 aaPredicted RBP14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 PPP4R1LQ9P1A2 415 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 B3GNT3Q9Y2A9 372 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 HEMK1Q9Y5R4 338 aaPredicted RBP14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 GATBO75879 557 aaKnown RBP14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 CAPNS1P04632 268 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 HCKP08631 526 aa14.37□□□□□ -0.11
PCDHA3-202ENST00000532566 DPTQ07507 201 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms