RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 OXSR1O95747 527 aaPredicted RBP17.14■□□□□ 0.33
PTPRK-218ENST00000525459 MXRA7P84157 204 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 GRAMD1BQ3KR37 738 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 PLEKHN1Q494U1 663 aaPredicted RBP17.14■□□□□ 0.33
PTPRK-218ENST00000525459 ERICH5Q6P6B1 374 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 FRRS1Q6ZNA5 592 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 SULF2Q8IWU5 870 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 BBS10Q8TAM1 723 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 GRHL3Q8TE85 626 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 SLC38A5Q8WUX1 472 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 HES7Q9BYE0 225 aa17.14■□□□□ 0.33
PTPRK-218ENST00000525459 DSPPQ9NZW4 1301 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 A0A0G2JPF8 293 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 HNRNPCL2B2RXH8 293 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 HNRNPCL3B7ZW38 293 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 NPIPB9F8W1W9 429 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 H3BNH8 94 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 ACOT7O00154 380 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 HNRNPCL1O60812 293 aaKnown RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 CBX6O95503 412 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 CRYABP02511 175 aaKnown RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 HNRNPCL4P0DMR1 293 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 CPA2P48052 419 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 MASP1P48740 699 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 MEOX1P50221 254 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 CBX1P83916 185 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 SYPL1Q16563 259 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 RABL3Q5HYI8 236 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 TYW3Q6IPR3 259 aaKnown RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 PGAM4Q8N0Y7 254 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 ZFP62Q8NB50 900 aaPredicted RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 NTNG2Q96CW9 530 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 TMEM19Q96HH6 336 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 SLC38A1Q9H2H9 487 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 MTHFD2LQ9H903 347 aaPredicted RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 BCL2L10Q9HD36 194 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 FBXO34Q9NWN3 711 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 ABCD2Q9UBJ2 740 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 B4GALT7Q9UBV7 327 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 ANGPT4Q9Y264 503 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 CCT8L1PA6NM43 557 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 CDK6Q00534 326 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 NFATC3Q12968 1075 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 SELPLGQ14242 412 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 GPR68Q15743 365 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 ZNF141Q15928 474 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 INTS11Q5TA45 600 aaKnown RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 REEP3Q6NUK4 255 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 FAM180AQ6UWF9 173 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 GALNT10Q86SR1 603 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 ANKFN1Q8N957 763 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 Q8NA96 180 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 HIPK4Q8NE63 616 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 OR10A6Q8NH74 314 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 REXO5Q96IC2 774 aaKnown RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 TREX2Q9BQ50 279 aaPredicted RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 DEPPQ9NTK1 212 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 MKLN1Q9UL63 735 aa17.13■□□□□ 0.33
PTPRK-218ENST00000525459 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.13■□□□□ 0.33
PTPRK-218ENST00000525459 PRAMEF27A3QJZ7 478 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 FAM220BPB1ANY3 271 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 TRIM3O75382 744 aaPredicted RBP17.12■□□□□ 0.33
PTPRK-218ENST00000525459 CHRM4P08173 479 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 ETS2P15036 469 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 GPR85P60893 370 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 PSME3P61289 254 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 C17orf67Q0P5P2 114 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 SCARB2Q14108 478 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 HYAL4Q2M3T9 481 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 SPATS1Q496A3 300 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 ZAR1Q86SH2 424 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 KRT73Q86Y46 540 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 PTRH1Q86Y79 214 aaKnown RBP17.12■□□□□ 0.33
PTPRK-218ENST00000525459 OR4C3Q8NH37 302 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 C1orf21Q9H246 121 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 ZFP64Q9NPA5 681 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 DTNAQ9Y4J8 743 aa17.12■□□□□ 0.33
PTPRK-218ENST00000525459 SNPHO15079 494 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 NDUFB5O43674 189 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 FCMRO60667 390 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 PDE9AO76083 593 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 NUDT7P0C024 238 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 PCGF2P35227 344 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 PTGDSP41222 190 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 DNASE1L1P49184 302 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 SLC7A2P52569 658 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 VEZF1Q14119 521 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 ZSWIM7Q19AV6 140 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 DESI1Q6ICB0 168 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.11■□□□□ 0.33
PTPRK-218ENST00000525459 SLC22A16Q86VW1 577 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 CALHM3Q86XJ0 350 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 SLC15A3Q8IY34 581 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 PEX5LQ8IYB4 626 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 C10orf111Q8N326 155 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 TNIP2Q8NFZ5 429 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 MAL2Q969L2 176 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 SPATA5L1Q9BVQ7 753 aa17.11■□□□□ 0.33
PTPRK-218ENST00000525459 TRIM8Q9BZR9 551 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms