RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-213	ENST00000519553	OR52B4	Q8NGK2	314 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	UPRT	Q96BW1	309 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	SLC25A38	Q96DW6	304 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	ELMO2	Q96JJ3	720 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	KCNK16	Q96T55	309 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	SLC25A51	Q9H1U9	297 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	ABCG2	Q9UNQ0	655 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	PDE10A	Q9Y233	779 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	USP16	Q9Y5T5	823 aa		4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.25	□□□□□ -1.73
PTPN12-213	ENST00000519553	ATRX	P46100	2492 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553		K7ENP7	123 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	DNAJB1	P25685	340 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	ASMT	P46597	345 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	CAMLG	P49069	296 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	RPL8	P62917	257 aa	Known RBP	4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	KCNJ11	Q14654	390 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	CDC37	Q16543	378 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	TOR1AIP1	Q5JTV8	583 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	PVRIG	Q6DKI7	326 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	CNST	Q6PJW8	725 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	IFNE	Q86WN2	208 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	CADM2	Q8N3J6	435 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	OR9A4	Q8NGU2	314 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	TESK2	Q96S53	571 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	COMMD4	Q9H0A8	199 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	PDF	Q9HBH1	243 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	NGB	Q9NPG2	151 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	UTP6	Q9NYH9	597 aa	Known RBP	4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	NYAP2	Q9P242	653 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553	CLCA3P	Q9Y6N3	262 aa		4.24	□□□□□ -1.73
PTPN12-213	ENST00000519553		A0A0U1RQV5	110 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	WASHC1	A8K0Z3	465 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	WASH3P	C4AMC7	463 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	ZNF254	O75437	659 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	TOM1L1	O75674	476 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	SCRG1	O75711	98 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	CCDC166	P0CW27	439 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	BCKDHA	P12694	445 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	RPL32	P62910	135 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	IL1RL1	Q01638	556 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	TEX44	Q53QW1	395 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	CXCL17	Q6UXB2	119 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	WASH2P	Q6VEQ5	465 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	CYS1	Q717R9	158 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	SYVN1	Q86TM6	617 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	SERPINA9	Q86WD7	417 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	PSMG2	Q969U7	264 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	NOL4L	Q96MY1	436 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	C1orf21	Q9H246	121 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	LPAR2	Q9HBW0	351 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	SPRR3	Q9UBC9	169 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	GMPPB	Q9Y5P6	360 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	CCDC7	Q96M83	1385 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	CUX2	O14529	1486 aa		4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553	PRRC2A	P48634	2157 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-213	ENST00000519553		B4DXG7	233 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553		E9PLD3	99 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	WWP2	O00308	870 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	OR7A17	O14581	309 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	LANCL1	O43813	399 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	PRPSAP2	O60256	369 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	TRIM3	O75382	744 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	CA3	P07451	260 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	ANXA3	P12429	323 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	ELK1	P19419	428 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	CYLC1	P35663	651 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	STAR	P49675	285 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	EFNA3	P52797	238 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	STX17	P56962	302 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	DCST2	Q5T1A1	773 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	ISLR2	Q6UXK2	745 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	MOB1B	Q7L9L4	216 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	ZNF414	Q96IQ9	312 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	MAGEB18	Q96M61	343 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	VSTM2L	Q96N03	204 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553		Q9H3A6	140 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	ANKMY1	Q9P2S6	941 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	ATP6V1H	Q9UI12	483 aa		4.22	□□□□□ -1.73
PTPN12-213	ENST00000519553	ANKRD30BL	A7E2S9	258 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	UQCRB	P14927	111 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	H2AFX	P16104	143 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	UGT1A3	P35503	534 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	NOVA1	P51513	510 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	DIO3	P55073	304 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	OR2B11	Q5JQS5	317 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	WSCD1	Q658N2	575 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	TFAP2E	Q6VUC0	442 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	C14orf178	Q8N769	122 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	STKLD1	Q8NE28	680 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	FRAT1	Q92837	279 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	PINX1	Q96BK5	328 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	TECTB	Q96PL2	329 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	FEM1A	Q9BSK4	669 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	TBCD	Q9BTW9	1192 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	NFKBIZ	Q9BYH8	718 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	KRT23	Q9C075	422 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	NMUR2	Q9GZQ4	415 aa		4.21	□□□□□ -1.74
PTPN12-213	ENST00000519553	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.21	□□□□□ -1.74

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