RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CCL27Q9Y4X3 112 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-216ENST00000512683 OR2M5A3KFT3 312 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 PSMG1O95456 288 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 CPA3P15088 417 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 KRT4P19013 534 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 KCNJ5P48544 419 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 PRR5P85299 388 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 C2orf80Q0P641 193 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 TMEM44Q2T9K0 475 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 VPS26BQ4G0F5 336 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 BEX5Q5H9J7 111 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 SPDYAQ5MJ70 313 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 RAET1LQ5VY80 246 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 FAM71E1Q6IPT2 247 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 VWA1Q6PCB0 445 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 PLEKHM3Q6ZWE6 761 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 IKBIPQ70UQ0 350 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 YTHDF3Q7Z739 585 aaKnown RBP11.31□□□□□ -0.6
VEGFA-216ENST00000512683 MED12LQ86YW9 2145 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 UBQLNLQ8IYU4 475 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF610Q8N9Z0 462 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.31□□□□□ -0.65e-12■□□□□ 8.7
VEGFA-216ENST00000512683 FIG4Q92562 907 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 EFHD2Q96C19 240 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-216ENST00000512683 PIK3IP1Q96FE7 263 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 LMF2Q9BU23 707 aaKnown RBP11.31□□□□□ -0.6
VEGFA-216ENST00000512683 PINK1Q9BXM7 581 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 MED11Q9P086 117 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 EMC9Q9Y3B6 208 aa11.31□□□□□ -0.6
VEGFA-216ENST00000512683 HIVEP2P31629 2446 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 H7C1Q1 480 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 UPK1AO00322 258 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 COPEO14579 308 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 KCNH1O95259 989 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 NGFRP08138 427 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF17P17021 662 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 NTSP30990 170 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 NCBP2P52298 156 aaKnown RBP eCLIP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 SUCLG1P53597 346 aaKnown RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF155Q12901 538 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 PCLAFQ15004 111 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 KIAA0040Q15053 153 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 PON3Q15166 354 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 SGCBQ16585 318 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 C10orf107Q8IVU9 208 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 WDR75Q8IWA0 830 aaKnown RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 C4orf33Q8N1A6 199 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 OR4N2Q8NGD1 307 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 OR6K3Q8NGY3 331 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 OR2W6PQ8NHA6 318 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 CEP70Q8NHQ1 597 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 FNDC9Q8TBE3 224 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 ACTRT2Q8TDY3 377 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 ELP4Q96EB1 424 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF764Q96H86 408 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 GMPPAQ96IJ6 420 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 HDHD5Q9BXW7 423 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 TBL1XR1Q9BZK7 514 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 OPN3Q9H1Y3 402 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 MYNNQ9NPC7 610 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF701Q9NV72 531 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 DDX18Q9NVP1 670 aaKnown RBP11.3□□□□□ -0.6
VEGFA-216ENST00000512683 GPR52Q9Y2T5 361 aa11.3□□□□□ -0.6
VEGFA-216ENST00000512683 VPS13CQ709C8 3753 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 C7orf72A4D263 438 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 B4DXG7 233 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 ADAMDEC1O15204 470 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 SIAH2O43255 324 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 SCO2O43819 266 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 RSL1D1O76021 490 aaKnown RBP11.29□□□□□ -0.6
VEGFA-216ENST00000512683 SOX30O94993 753 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 HSPA4LO95757 839 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 PABPC4LP0CB38 370 aaKnown RBP11.29□□□□□ -0.6
VEGFA-216ENST00000512683 UROSP10746 265 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 CFAP157Q5JU67 520 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 PDSS1Q5T2R2 415 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 LIPMQ5VYY2 423 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 CLEC6AQ6EIG7 209 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 NOXRED1Q6NXP6 359 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 BEND4Q6ZU67 534 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-216ENST00000512683 STK32CQ86UX6 486 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 MISPQ8IVT2 679 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 PPP1R14CQ8TAE6 165 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 IGFBPL1Q8WX77 278 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 HOXB13Q92826 284 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-216ENST00000512683 ZBTB8AQ96BR9 441 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 EGLN2Q96KS0 407 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 Q96MF0 132 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 AMDHD1Q96NU7 426 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 GATA5Q9BWX5 397 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-216ENST00000512683 PRRG4Q9BZD6 226 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 CXorf56Q9H5V9 222 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 RRAGDQ9NQL2 400 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-216ENST00000512683 MCTS1Q9ULC4 181 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms