RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 P2RY6Q15077 328 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 CCNYL2Q5T2Q4 361 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 MFSD12Q6NUT3 480 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 PAGE2Q7Z2X7 111 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 TBC1D1Q86TI0 1168 aaPredicted RBP10.28□□□□□ -0.76
RNF4-216ENST00000511859 GGNQ86UU5 652 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 WDR75Q8IWA0 830 aaKnown RBP10.28□□□□□ -0.76
RNF4-216ENST00000511859 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 TEX9Q8N6V9 391 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 OR10D3Q8NH80 312 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 WDR20Q8TBZ3 569 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 KISS1RQ969F8 398 aaPredicted RBP10.28□□□□□ -0.76
RNF4-216ENST00000511859 ERP27Q96DN0 273 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 C1GALT1C1Q96EU7 318 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 HBEGFQ99075 208 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 POTEKPQ9BYX7 375 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 CDC42EP4Q9H3Q1 356 aaKnown RBP10.28□□□□□ -0.76
RNF4-216ENST00000511859 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 NINJ2Q9NZG7 142 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 NUDT4Q9NZJ9 180 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 ANGPTL3Q9Y5C1 460 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 PCDHA9Q9Y5H5 950 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 ARFGEF3Q5TH69 2177 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 ADAMDEC1O15204 470 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 SCO2O43819 266 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 KIAA0513O60268 411 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 FADS1O60427 444 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 BMP4P12644 408 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 PCSK2P16519 638 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 STMN1P16949 149 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 AGTR1P30556 359 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 CLK3P49761 638 aaKnown RBP10.27□□□□□ -0.76
RNF4-216ENST00000511859 CDH11P55287 796 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 IRF9Q00978 393 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 CPSF6Q16630 551 aaKnown RBP eCLIP10.27□□□□□ -0.76
RNF4-216ENST00000511859 TMEM44Q2T9K0 475 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 FAM174BQ3ZCQ3 159 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 TMEM201Q5SNT2 666 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 C3orf62Q6ZUJ4 267 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 ATG4DQ86TL0 474 aaPredicted RBP10.27□□□□□ -0.76
RNF4-216ENST00000511859 ISCA2Q86U28 154 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 DUSP19Q8WTR2 217 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 UBTD2Q8WUN7 234 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 ZFAND2BQ8WV99 257 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 EXT2Q93063 718 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 EFHD2Q96C19 240 aaPredicted RBP10.27□□□□□ -0.76
RNF4-216ENST00000511859 MSI2Q96DH6 328 aaKnown RBP10.27□□□□□ -0.76
RNF4-216ENST00000511859 EML4Q9HC35 981 aaKnown RBP10.27□□□□□ -0.76
RNF4-216ENST00000511859 ABCG2Q9UNQ0 655 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 MTO1Q9Y2Z2 717 aaKnown RBP10.27□□□□□ -0.76
RNF4-216ENST00000511859 ZNF780BQ9Y6R6 833 aa10.27□□□□□ -0.76
RNF4-216ENST00000511859 C17orf51A8MQB3 221 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 H7C417 338 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 PHGDHO43175 533 aaKnown RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 ITGA2P17301 1181 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 PTNP21246 168 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 COMPP49747 757 aaPredicted RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 EFNA4P52798 201 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 MAPK12P53778 367 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 CORO7P57737 925 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 MRPS35P82673 323 aaKnown RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 C17orf67Q0P5P2 114 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 TSC22D1Q15714 1073 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 PDSS1Q5T2R2 415 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 SEZ6L2Q6UXD5 910 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 FBXL14Q8N1E6 418 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ZNF619Q8N2I2 560 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 MUC15Q8N387 334 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ZNF675Q8TD23 568 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 FBF1Q8TES7 1133 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 MUCL1Q96DR8 90 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 MRRFQ96E11 262 aaKnown RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 C1orf159Q96HA4 380 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ADGRG7Q96K78 797 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 VSTM2LQ96N03 204 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ZNF681Q96N22 645 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 DHRS9Q9BPW9 319 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ALG9Q9H6U8 611 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 CAB39LQ9H9S4 337 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ACOT9Q9Y305 439 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 A0A0A6YYJ9 748 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 GOLGA8QA0A0J9YX86 632 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 GOLGA8OA6NCC3 632 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 SUPT3HB4E1H0 165 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 GOLGA8NF8WBI6 632 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 SLCO1B7G3V0H7 640 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 GOLGA8RI6L899 631 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 NDUFS8O00217 210 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ABCD4O14678 606 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 SUPT3HO75486 399 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ADAP00813 363 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 TGFAP01135 160 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 ZNF17P17021 662 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 RAC1P63000 192 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 PPA1Q15181 289 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 RNPS1Q15287 305 aaKnown RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 WDR93Q6P2C0 686 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 TFAP2EQ6VUC0 442 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 Q6ZSR9 355 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms