RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 LASP1Q14847 261 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 ZNHIT3Q15649 155 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 AGKQ53H12 422 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 CCNJQ5T5M9 372 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 SAXO2Q658L1 398 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 SLC30A6Q6NXT4 461 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 APOOLQ6UXV4 268 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 DLEU7Q6UYE1 221 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 B3GNT6Q6ZMB0 384 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 SPATA21Q7Z572 469 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 CCDC71Q8IV32 467 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 SLC44A2Q8IWA5 706 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 HOMEZQ8IX15 550 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 MCEMP1Q8IX19 187 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 OR4A15Q8NGL6 344 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 OR1J4Q8NGS1 313 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM110BQ8TC76 370 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 ZFP90Q8TF47 636 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 TMBIM1Q969X1 311 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 COL21A1Q96P44 957 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 OR52E6Q96RD3 313 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 ADOQ96SZ5 270 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 OSBPL11Q9BXB4 747 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 ANGPTL4Q9BY76 406 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 KCNJ16Q9NPI9 418 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 ZCCHC3Q9NUD5 404 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 DDX18Q9NVP1 670 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM120CQ9NX05 1096 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 QPCTLQ9NXS2 382 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 VAPAQ9P0L0 249 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 GMPR2Q9P2T1 348 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 KCNE5Q9UJ90 142 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 ADAM21Q9UKJ8 722 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 RNF6Q9Y252 685 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 SNX8Q9Y5X2 465 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 KIAA1549Q9HCM3 1950 aa7.98□□□□□ -1.13
PDLIM5-213ENST00000509357 MED12Q93074 2177 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 HEATR5AQ86XA9 2040 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 NPIPA5A0A0B4J1W7 369 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 RNF103-CHMP3A0A140T963 221 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 PRAMEF25A6NGN4 478 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 CCDC154A6NI56 674 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM47E-STBD1D6RA91 191 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 NPIPA7E9PJI5 369 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 ABCB7O75027 752 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 WDR1O75083 606 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 ICOSLGO75144 302 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 BCAS1O75363 584 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 TRIM3O75382 744 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 NUDT7P0C024 238 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 NPIPA8P0DM63 369 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 TROVE2P10155 538 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 CYP4B1P13584 511 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 GABRA1P14867 456 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 DDX5P17844 614 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 ELAVL4P26378 380 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 CHRNB4P30926 498 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 RPL3P39023 403 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 RFX3P48380 749 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 CCT3P49368 545 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 RNF144AP50876 292 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 NUP107P57740 925 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 PSPHP78330 225 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 MRPS22P82650 360 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 EFR3AQ14156 821 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 CDSNQ15517 529 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 EMC4Q5J8M3 183 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 LRIF1Q5T3J3 769 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 C1orf185Q5T7R7 199 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 TIGD3Q6B0B8 471 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 SZRD1Q7Z422 152 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 C6orf120Q7Z4R8 191 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 RPRMLQ8N4K4 120 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 MARVELD2Q8N4S9 558 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 POU5F2Q8N7G0 328 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 ZFP28Q8NHY6 868 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 FBXO27Q8NI29 283 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 NEIL3Q8TAT5 605 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 PNPT1Q8TCS8 783 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 SFXN5Q8TD22 340 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 CDS1Q92903 461 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 EFHD2Q96C19 240 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 SPDL1Q96EA4 605 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 ARSGQ96EG1 525 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 DTNBP1Q96EV8 351 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 TMEM41AQ96HV5 264 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 MS4A4EQ96PG1 132 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 OR7D2Q96RA2 312 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 SIKE1Q9BRV8 207 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 SLC39A3Q9BRY0 314 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 TTYH2Q9BSA4 534 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 GALNT9Q9HCQ5 603 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 ACKR4Q9NPB9 350 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 SPRR3Q9UBC9 169 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 USP22Q9UPT9 525 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 MAPRE3Q9UPY8 281 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 C15orf41Q9Y2V0 281 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 PCDHB14Q9Y5E9 798 aa7.97□□□□□ -1.13
PDLIM5-213ENST00000509357 CRYBG3Q68DQ2 2970 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms