RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TRIM2Q9C040 744 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 NOL11Q9H8H0 719 aaKnown RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ANKZF1Q9H8Y5 726 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 FAM120CQ9NX05 1096 aaKnown RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 TAS2R9Q9NYW1 312 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 UTS2RQ9UKP6 389 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 MCTS1Q9ULC4 181 aaKnown RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 OR10H1Q9Y4A9 318 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 TRRAPQ9Y4A5 3859 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
NEDD9-211ENST00000508546 ADAMDEC1O15204 470 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 EIF3HO15372 352 aaKnown RBP eCLIP8.36□□□□□ -1.07
NEDD9-211ENST00000508546 SSX4O60224 188 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 DLX3O60479 287 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 NME6O75414 186 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-211ENST00000508546 TUBBP07437 444 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 GSTA2P09210 222 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 ZNF17P17021 662 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 AGTR1P30556 359 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 ARL1P40616 181 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-211ENST00000508546 ALDH9A1P49189 494 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 TRAF3Q13114 568 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 STX5Q13190 355 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 TAB1Q15750 504 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 CYP27C1Q4G0S4 372 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 SFRP5Q5T4F7 317 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 GTF2IRD2BQ6EKJ0 949 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 PPP4R4Q6NUP7 873 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 FIGNL1Q6PIW4 674 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 SEZ6L2Q6UXD5 910 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 C3orf62Q6ZUJ4 267 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 GTF2IRD2Q86UP8 949 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 WDR75Q8IWA0 830 aaKnown RBP8.36□□□□□ -1.07
NEDD9-211ENST00000508546 CTAGE3PQ8IX95 158 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 KBTBD8Q8NFY9 601 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 OR9A2Q8NGT5 310 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 OR10D3Q8NH80 312 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 PIWIL2Q8TC59 973 aaKnown RBP8.36□□□□□ -1.07
NEDD9-211ENST00000508546 DUSP19Q8WTR2 217 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 KCTD4Q8WVF5 259 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 KAT2AQ92830 837 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 ATP6V1E2Q96A05 226 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 TRIM31Q9BZY9 425 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 SHARPINQ9H0F6 387 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 BRF2Q9HAW0 419 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 FAIMQ9NVQ4 179 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 ARGLU1Q9NWB6 273 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-211ENST00000508546 FBXO34Q9NWN3 711 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 XPR1Q9UBH6 696 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 SLC12A4Q9UP95 1085 aa8.36□□□□□ -1.07
NEDD9-211ENST00000508546 FAM234BA2RU67 622 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 DPRXA6NFQ7 191 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 SERINC4A6NH21 518 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 KLHL2O95198 593 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 SYNGR4O95473 234 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 IL33O95760 270 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 C2P06681 752 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 PYGBP11216 843 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 SLC25A16P16260 332 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 EGR1P18146 543 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 SRD5A1P18405 259 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 IL32P24001 234 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 CLK3P49761 638 aaKnown RBP8.35□□□□□ -1.07
NEDD9-211ENST00000508546 NUDT6P53370 316 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 RAC1P63000 192 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 IRF9Q00978 393 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 BSPH1Q075Z2 132 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 C17orf67Q0P5P2 114 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 GLE1Q53GS7 698 aaKnown RBP8.35□□□□□ -1.07
NEDD9-211ENST00000508546 UBAP2Q5T6F2 1119 aaKnown RBP8.35□□□□□ -1.07
NEDD9-211ENST00000508546 LGSNQ5TDP6 509 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 CYB5R2Q6BCY4 276 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 MFSD12Q6NUT3 480 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 CLEC2AQ6UVW9 174 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 ESPNLQ6ZVH7 1005 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 GALNT10Q86SR1 603 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 MARCH3Q86UD3 253 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 KLHL7Q8IXQ5 586 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 PPM1NQ8N819 430 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 MTBPQ96DY7 904 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 ADAD1Q96M93 576 aaKnown RBP8.35□□□□□ -1.07
NEDD9-211ENST00000508546 GPR78Q96P69 363 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 HBEGFQ99075 208 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 POTEKPQ9BYX7 375 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 SHCBP1LQ9BZQ2 653 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 ELOVL6Q9H5J4 265 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 C12orf49Q9H741 205 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 HHATLQ9HCP6 504 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 PFDN4Q9NQP4 134 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 FARSBQ9NSD9 589 aaKnown RBP8.35□□□□□ -1.07
NEDD9-211ENST00000508546 NMRK1Q9NWW6 199 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 CISD1Q9NZ45 108 aaKnown RBP8.35□□□□□ -1.07
NEDD9-211ENST00000508546 FLRT3Q9NZU0 649 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 CPSF2Q9P2I0 782 aaKnown RBP8.35□□□□□ -1.07
NEDD9-211ENST00000508546 PCTPQ9UKL6 214 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 B3GALT5Q9Y2C3 310 aa8.35□□□□□ -1.07
NEDD9-211ENST00000508546 A0A087WV62 115 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms