RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CISD3P0C7P0 127 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 ATP12AP54707 1039 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 E2F1Q01094 437 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 SLC25A35Q3KQZ1 300 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 PLBD1Q6P4A8 553 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 GDF7Q7Z4P5 450 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 OAFQ86UD1 273 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 RFT1Q96AA3 541 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 DHRS9Q9BPW9 319 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 XKR8Q9H6D3 395 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 B3GNT2Q9NY97 397 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 ASB4Q9Y574 426 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 SNRNP200O75643 2136 aaKnown RBP11.1□□□□□ -0.63
UBE3D-206ENST00000505226 DOCK9Q9BZ29 2069 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 RGS9O75916 674 aaPredicted RBP11.1□□□□□ -0.63
UBE3D-206ENST00000505226 SLC22A5O76082 557 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 FPR3P25089 353 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 SNRPNP63162 240 aaKnown RBP11.1□□□□□ -0.63
UBE3D-206ENST00000505226 NTHL1P78549 312 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 NUMA1Q14980 2115 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 HBMQ6B0K9 141 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 SDE2Q6IQ49 451 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 KRT74Q7RTS7 529 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 ADCK2Q7Z695 626 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 LRRTM4Q86VH4 590 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 AMZ2Q86W34 360 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF680Q8NEM1 530 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 NACC2Q96BF6 587 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 LRIG1Q96JA1 1093 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 MED28Q9H204 178 aa11.1□□□□□ -0.63
UBE3D-206ENST00000505226 CENPVL1A0A0U1RR11 272 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 CIB4A0PJX0 185 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 C7orf66A4D0T2 115 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 PRRT4C9JH25 899 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 SHOXO15266 292 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 CHST10O43529 356 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 LZTS3O60299 673 aaPredicted RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 CFL1P23528 166 aaKnown RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 NUDT1P36639 197 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 MC3RP41968 323 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 RFX3P48380 749 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 MTNR1BP49286 362 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ST3GAL3Q11203 375 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 AGERQ15109 404 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 LTB4RQ15722 352 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF77Q15935 545 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 NTRK2Q16620 822 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 RNASE12Q5GAN4 147 aaKnown RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 LRRC28Q86X40 367 aaPredicted RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF431Q8TF32 576 aaPredicted RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 OSTF1Q92882 214 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ZBP1Q9H171 429 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 UBQLN3Q9H347 655 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 CDCP1Q9H5V8 836 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 FOLH1BQ9HBA9 442 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 BABAM2Q9NXR7 383 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 EIF3KQ9UBQ5 218 aaKnown RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF222Q9UK12 451 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 CACNG2Q9Y698 323 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 LOC105369274A0A096LPK9 316 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 A0A0B4J203 849 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 NFATC1O95644 943 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 DRD2P14416 443 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF250P15622 560 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 BCL6P41182 706 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 PITPNBP48739 271 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 PDX1P52945 283 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ARHGAP15Q53QZ3 475 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 RPTNQ6XPR3 784 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 RRM2BQ7LG56 351 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 OR4N4Q8N0Y3 316 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 C17orf47Q8NEP4 570 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 OR9A2Q8NGT5 310 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ACOT11Q8WXI4 607 aaPredicted RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ARSGQ96EG1 525 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ZNF514Q96K75 400 aaPredicted RBP11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ALG8Q9BVK2 526 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 PIGUQ9H490 435 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ZDHHC4Q9NPG8 344 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 ADAM29Q9UKF5 820 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 CLEC4AQ9UMR7 237 aa11.09□□□□□ -0.63
UBE3D-206ENST00000505226 LATO43561 262 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 REM1O75628 298 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SOX30O94993 753 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 IFNGR2P38484 337 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 STAT5AP42229 794 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 DPTQ07507 201 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 LYPD4Q6UWN0 246 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 SYT9Q86SS6 491 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 OR6C4Q8NGE1 309 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 KAT2AQ92830 837 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 KISS1RQ969F8 398 aaPredicted RBP11.08□□□□□ -0.64
UBE3D-206ENST00000505226 CCDC120Q96HB5 630 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 NT5DC2Q9H857 520 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 PRDM7Q9NQW5 492 aa11.08□□□□□ -0.64
UBE3D-206ENST00000505226 CES1P1Q9UKY3 287 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms