RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ATP6V1C1P21283 382 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 SRD5A2P31213 254 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 MDH1P40925 334 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 TRPC1P48995 793 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 TXNL4AP83876 142 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 TOMM20Q15388 145 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 GXYLT1Q4G148 440 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 EIPR1Q53HC9 387 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 NHSL2Q5HYW2 709 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 EMC4Q5J8M3 183 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 OR5M10Q6IEU7 315 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 HEPHL1Q6MZM0 1159 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 BLOC1S3Q6QNY0 202 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 EID3Q8N140 333 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 OR4K17Q8NGC6 315 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 VPS33AQ96AX1 596 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 ITCHQ96J02 903 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 SDF2Q99470 211 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 HOXD1Q9GZZ0 328 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 TP63Q9H3D4 680 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 ZNF385DQ9H6B1 395 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 HHATLQ9HCP6 504 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 EXD2Q9NVH0 621 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 SUCOQ9UBS9 1254 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 TRIM33Q9UPN9 1127 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 MEMO1Q9Y316 297 aa16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 MRPS18CQ9Y3D5 142 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 USP9XQ93008 2570 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-209ENST00000503346 A0A1W2PQD3 144 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 E9PLN8 166 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 SCDO00767 359 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 C1QCP02747 245 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 GSNP06396 782 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 VIMP08670 466 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 TROVE2P10155 538 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 MAGEA8P43361 318 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 KHKP50053 298 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 CASP9P55211 416 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 C17orf67Q0P5P2 114 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 STX5Q13190 355 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 ARHGAP11BQ3KRB8 267 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 WIPI1Q5MNZ9 446 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 METTL21CQ5VZV1 264 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 CGB2Q6NT52 195 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 TNFAIP8L2Q6P589 184 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 YRDCQ86U90 279 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 OR2M3Q8NG83 312 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 ZFP90Q8TF47 636 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 DUSP19Q8WTR2 217 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 PHF10Q8WUB8 498 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 GTF2H4Q92759 462 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 CCDC120Q96HB5 630 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 DMRTA2Q96SC8 542 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 VKORC1Q9BQB6 163 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 DSN1Q9H410 356 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 RABEP2Q9H5N1 569 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 SLC52A3Q9NQ40 469 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 PNPLA3Q9NST1 481 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 CCDC167Q9P0B6 97 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 TNFRSF10DQ9UBN6 386 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 ACAD8Q9UKU7 415 aa16.58■□□□□ 0.24
PDLIM7-209ENST00000503346 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 C15orf38-AP3S2A0A0A6YYH1 394 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 NPIPB9F8W1W9 429 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 KRT75O95678 551 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 GUSBP08236 651 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 OR12D1P0DN82 309 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 ESRRAP11474 423 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 HPGDP15428 266 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 DCTP40126 519 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 DSCR4P56555 118 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 CRYZQ08257 329 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 GANABQ14697 944 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 FLYWCH1Q4VC44 716 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 ATAD3BQ5T9A4 648 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 WLSQ5T9L3 541 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 DNAJC14Q6Y2X3 702 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 RNF130Q86XS8 419 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 MISPQ8IVT2 679 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 SPDL1Q96EA4 605 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 PSMG3-AS1Q96PY0 264 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 TMEM120AQ9BXJ8 343 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 ZNF350Q9GZX5 532 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 SLC6A13Q9NSD5 602 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 TAS2R10Q9NYW0 307 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 MED11Q9P086 117 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 SLC6A5Q9Y345 797 aa16.57■□□□□ 0.24
PDLIM7-209ENST00000503346 FIGNL2A6NMB9 653 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 NR5A2O00482 541 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 DYNC1I1O14576 645 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 NDUFB5O43674 189 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 ZIC3O60481 467 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 ZG16O60844 167 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 STX11O75558 287 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 NCF2P19878 526 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 DPP4P27487 766 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 ATP12AP54707 1039 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 AGKQ53H12 422 aa16.56■□□□□ 0.24
PDLIM7-209ENST00000503346 KLHL26Q53HC5 615 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms