RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ELSPBP1Q96BH3 223 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 EFHD2Q96C19 240 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-204ENST00000501271 TM4SF19Q96DZ7 209 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 SMIM10Q96HG1 83 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 GABRG3Q99928 467 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 LRP4O75096 1905 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 GSAPA4D1B5 854 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 EPOPA6NHQ4 379 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 SOCS6O14544 535 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 CCNKO75909 580 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 CSF3P09919 207 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 PRG2P13727 222 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 FUT1P19526 365 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 FGF9P31371 208 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-204ENST00000501271 SSTR4P31391 388 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 ACTR1BP42025 376 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 KIAA1024LP59773 190 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 ACTR1AP61163 376 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 EEF1A1P68104 462 aaKnown RBP9.19□□□□□ -0.94
CLIP1-204ENST00000501271 INSL4Q14641 139 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 GPR68Q15743 365 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 MAPK14Q16539 360 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 DDI2Q5TDH0 399 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 FCRL6Q6DN72 434 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 VASNQ6EMK4 673 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 HSDL2Q6YN16 418 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 WDR88Q6ZMY6 472 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 PEX5LQ8IYB4 626 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 TMEFF1Q8IYR6 380 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 SCAIQ8N9R8 606 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 RFKQ969G6 155 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 DIRAS2Q96HU8 199 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 SAMD8Q96LT4 415 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 SERINC2Q96SA4 455 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 SDF2Q99470 211 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 PBX4Q9BYU1 374 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 TMEM168Q9H0V1 697 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 TRIM45Q9H8W5 580 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-204ENST00000501271 MTHFD2LQ9H903 347 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-204ENST00000501271 HINT3Q9NQE9 182 aaKnown RBP9.19□□□□□ -0.94
CLIP1-204ENST00000501271 PHF11Q9UIL8 331 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 CBLCQ9ULV8 474 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 DAPP1Q9UN19 280 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 CLCA2Q9UQC9 943 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 MRPS2Q9Y399 296 aaKnown RBP9.19□□□□□ -0.94
CLIP1-204ENST00000501271 CDH10Q9Y6N8 788 aa9.19□□□□□ -0.94
CLIP1-204ENST00000501271 LOC105369274A0A096LPK9 316 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 LOC102723532A0A0G2JNH3 316 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 SHISA3A0PJX4 238 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 FABP12A6NFH5 140 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 FAM183AA6NL82 134 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 IGHA1P01876 353 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 ZGLP1P0C6A0 271 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 GSTT2P0CG29 244 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 GSTT2BP0CG30 244 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 HOXB2P14652 356 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 UGT2B7P16662 529 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 HTR2AP28223 471 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 NDUFS1P28331 727 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 GCGRP47871 477 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 FXYD6P3P58550 94 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 COPZ1P61923 177 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 DBPQ10586 325 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-204ENST00000501271 FZD5Q13467 585 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 NFATC4Q14934 902 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 SUZ12Q15022 739 aaKnown RBP9.18□□□□□ -0.94
CLIP1-204ENST00000501271 ZNF628Q5EBL2 1059 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 RSBN1Q5VWQ0 802 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-204ENST00000501271 ANKRD54Q6NXT1 300 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 TMEM53Q6P2H8 277 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 B3GLCTQ6Y288 498 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 ZNF517Q6ZMY9 492 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-204ENST00000501271 UTS2BQ765I0 119 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 PRSS41Q7RTY9 318 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 OR4N4Q8N0Y3 316 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 SIRT6Q8N6T7 355 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 ARIH2OSQ8N7S6 290 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 OR2T33Q8NG76 320 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 OR6F1Q8NGZ6 308 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 OR10G6Q8NH81 332 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 SLC35B4Q969S0 331 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 CTRCQ99895 268 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 PRSS27Q9BQR3 290 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 TMED9Q9BVK6 235 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 NPAP1Q9NZP6 1156 aa9.18□□□□□ -0.94
CLIP1-204ENST00000501271 EXOGQ9Y2C4 368 aaKnown RBP9.18□□□□□ -0.94
CLIP1-204ENST00000501271 NPIPA5A0A0B4J1W7 369 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 TRDV1A0A1B0GX56 115 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 A6NCN8 305 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 NPIPA7E9PJI5 369 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 B3GALT2O43825 422 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 LDB3O75112 727 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 NCR1O76036 304 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 AGR2O95994 175 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 GKN3PP0CG01 181 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 NPIPA8P0DM63 369 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 LAMP2P13473 410 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 CPMP14384 443 aa9.17□□□□□ -0.94
CLIP1-204ENST00000501271 POLR2CP19387 275 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms