RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 C1QL3Q5VWW1 255 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 OLIG3Q7RTU3 272 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 GATSQ8NAP1 163 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 OR4K17Q8NGC6 315 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 PHF12Q96QT6 1004 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 FAM107BQ9H098 131 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 NSRP1Q9H0G5 558 aaKnown RBP15.28■□□□□ 0.04
PRKCB-210ENST00000498739 TPT1P8Q9HAU6 139 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 ACKR4Q9NPB9 350 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 FBXL2Q9UKC9 423 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 ZNF835Q9Y2P0 537 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 PCDHB14Q9Y5E9 798 aa15.28■□□□□ 0.04
PRKCB-210ENST00000498739 A0A1B0GVC2 190 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 ALG1L2C9J202 215 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 HMGN4O00479 90 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 ANGPT2O15123 496 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 NDUFB5O43674 189 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 SUSD5O60279 629 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 HCN1O60741 890 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 STX11O75558 287 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 TPOP07202 933 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 CRATP43155 626 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 CASP6P55212 293 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 TXNL4AP83876 142 aaKnown RBP15.27■□□□□ 0.04
PRKCB-210ENST00000498739 GPR68Q15743 365 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 C3AR1Q16581 482 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.27■□□□□ 0.047e-7■■□□□ 14
PRKCB-210ENST00000498739 GPAT3Q53EU6 434 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 WIPI1Q5MNZ9 446 aaPredicted RBP15.27■□□□□ 0.04
PRKCB-210ENST00000498739 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRKCB-210ENST00000498739 HEPHL1Q6MZM0 1159 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 ZNF614Q8N883 585 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 ZNF527Q8NB42 609 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 FAM83FQ8NEG4 500 aaPredicted RBP15.27■□□□□ 0.04
PRKCB-210ENST00000498739 NEIL3Q8TAT5 605 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 DUSP19Q8WTR2 217 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 ROPN1LQ96C74 230 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 DTNBP1Q96EV8 351 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 ELAC2Q9BQ52 826 aaKnown RBP15.27■□□□□ 0.04
PRKCB-210ENST00000498739 HOXD1Q9GZZ0 328 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 DSN1Q9H410 356 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 MRGBPQ9NV56 204 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 MED11Q9P086 117 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 SLAMF8Q9P0V8 285 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 TNFRSF10DQ9UBN6 386 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 LEF1Q9UJU2 399 aaPredicted RBP15.27■□□□□ 0.04
PRKCB-210ENST00000498739 TINAGQ9UJW2 476 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 DKKL1Q9UK85 242 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 NDUFAF1Q9Y375 327 aa15.27■□□□□ 0.04
PRKCB-210ENST00000498739 B4DXG7 233 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 NPIPA2E9PIF3 369 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 NPIPA3F8WFD2 350 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 AQP7O14520 342 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 PRRG2O14669 202 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 LRRTM2O43300 516 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 GMFGO60234 142 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 FCMRO60667 390 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 SEMA7AO75326 666 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 SNRPB2P08579 225 aaKnown RBP15.26■□□□□ 0.03
PRKCB-210ENST00000498739 HOXB9P17482 250 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-210ENST00000498739 ENDOUP21128 410 aaKnown RBP15.26■□□□□ 0.03
PRKCB-210ENST00000498739 RNF144AP50876 292 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-210ENST00000498739 ATP12AP54707 1039 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 HPCAP84074 193 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 C17orf67Q0P5P2 114 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 FUT5Q11128 374 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 C4orf17Q53FE4 359 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 EIPR1Q53HC9 387 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 LRIF1Q5T3J3 769 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 Q6ZPB1 254 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-210ENST00000498739 SPATA21Q7Z572 469 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 YRDCQ86U90 279 aaKnown RBP15.26■□□□□ 0.03
PRKCB-210ENST00000498739 CD163Q86VB7 1156 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 FJX1Q86VR8 437 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 FAM26EQ8N5C1 309 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 OR2M3Q8NG83 312 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 OR14L1PQ8NHC6 308 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 FAM57AQ8TBR7 257 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 ZNF350Q9GZX5 532 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 SAR1AQ9NR31 198 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 SPRR3Q9UBC9 169 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 MKLN1Q9UL63 735 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 SLC5A6Q9Y289 635 aa15.26■□□□□ 0.03
PRKCB-210ENST00000498739 C15orf38-AP3S2A0A0A6YYH1 394 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 A0A1W2PQD3 144 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 GMNCA6NCL1 334 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 CLIC1O00299 241 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 AGFG2O95081 481 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 ETFAP13804 333 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 TCEA1P23193 301 aaKnown RBP15.25■□□□□ 0.03
PRKCB-210ENST00000498739 SRD5A2P31213 254 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 CA7P43166 264 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 MVDP53602 400 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 SRSF1Q07955 248 aaKnown RBP eCLIP15.25■□□□□ 0.03
PRKCB-210ENST00000498739 KLF10Q13118 480 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 CD226Q15762 336 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 SYPL1Q16563 259 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 CPLX4Q7Z7G2 160 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 MSRB3Q8IXL7 192 aa15.25■□□□□ 0.03
PRKCB-210ENST00000498739 FADS6Q8N9I5 356 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms