RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 DHRS4-AS1Q9P1J3 65 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 TMCC3Q9ULS5 477 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 SNX6Q9UNH7 406 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 MRPS7Q9Y2R9 242 aaKnown RBP3.13□□□□□ -1.91
SMC4-225ENST00000497203 CSAG2Q9Y5P2 127 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 COL5A2P05997 1499 aaPredicted RBP3.13□□□□□ -1.91
SMC4-225ENST00000497203 KIF16BQ96L93 1317 aa3.13□□□□□ -1.91
SMC4-225ENST00000497203 ZNF840PA6NDX5 716 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 ZSCAN5CA6NGD5 496 aaPredicted RBP3.12□□□□□ -1.91
SMC4-225ENST00000497203 PPIAL4DF5H284 164 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 CTAGE5O15320 804 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 PHF1O43189 567 aaPredicted RBP3.12□□□□□ -1.91
SMC4-225ENST00000497203 VENTXO95231 258 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 MBD3O95983 291 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 OPN1LWP04000 364 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 DRD5P21918 477 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 GNPDA1P46926 289 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 OR1D4P47884 311 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 ALDH3B2P48448 385 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 CSTF1Q05048 431 aaKnown RBP3.12□□□□□ -1.91
SMC4-225ENST00000497203 ATXN7L3Q14CW9 347 aaPredicted RBP3.12□□□□□ -1.91
SMC4-225ENST00000497203 PDK4Q16654 411 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 C15orf32Q32M92 178 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 USH1GQ495M9 461 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 NADK2Q4G0N4 442 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 TEX44Q53QW1 395 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 RNLSQ5VYX0 342 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 OR8G2PQ6IF36 304 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 BLOC1S2Q6QNY1 142 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 CCBE1Q6UXH8 406 aaPredicted RBP3.12□□□□□ -1.91
SMC4-225ENST00000497203 STAC2Q6ZMT1 411 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 LANCL3Q6ZV70 420 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 TMEM17Q86X19 198 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 ZDHHC21Q8IVQ6 265 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 BPIFB2Q8N4F0 458 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 ZNF540Q8NDQ6 660 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 DENND6BQ8NEG7 585 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 SPRYD4Q8WW59 207 aaPredicted RBP3.12□□□□□ -1.91
SMC4-225ENST00000497203 C4orf36Q96KX1 117 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 CASD1Q96PB1 797 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 POLR3FQ9H1D9 316 aaPredicted RBP3.12□□□□□ -1.91
SMC4-225ENST00000497203 CALHM2Q9HA72 323 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 PALMDQ9NP74 551 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 DPM3Q9P2X0 92 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 DUSP12Q9UNI6 340 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 OR10H1Q9Y4A9 318 aa3.12□□□□□ -1.91
SMC4-225ENST00000497203 A0A087WWV3 80 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 FAM74A7A6NL05 159 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 SLC17A2O00624 439 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 GMFGO60234 142 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 ZNF253O75346 499 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 RHOBTB1O94844 696 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 HBQ1P09105 142 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 ALPIP09923 528 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 CLUP10909 449 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 PDHBP11177 359 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 LAMP1P11279 417 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 HNRNPA2B1P22626 353 aaKnown RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 ATP5A1P25705 553 aaKnown RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 CDH5P33151 784 aaPredicted RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 CHI3L1P36222 383 aaPredicted RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 RPL4P36578 427 aaKnown RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 MAGEA9P43362 315 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 IFNAR2P48551 515 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 IST1P53990 364 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 RND3P61587 244 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 SNTB2Q13425 540 aaKnown RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 MAPK6Q16659 721 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 SLC22A6Q4U2R8 563 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 FAM74A3Q4VXF1 159 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 EIPR1Q53HC9 387 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 CELF3Q5SZQ8 465 aaKnown RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 ATAD3BQ5T9A4 648 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 GCNT7Q6ZNI0 430 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 DPY19L4Q7Z388 723 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 MARCH9Q86YJ5 346 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 GRAMD2AQ8IUY3 354 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 UNC5CLQ8IV45 518 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 HSCBQ8IWL3 235 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 SLC39A11Q8N1S5 342 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 RAET1EQ8TD07 263 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 PPP1R16AQ96I34 528 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 OR5M11Q96RB7 305 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 TXN2Q99757 166 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 ALG12Q9BV10 488 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 ELOVL4Q9GZR5 314 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 RAB33BQ9H082 229 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 RMND5AQ9H871 391 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 MEPEQ9NQ76 525 aaPredicted RBP3.11□□□□□ -1.91
SMC4-225ENST00000497203 SMC3Q9UQE7 1217 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 SMAD5-AS1Q9Y6J3 95 aa3.11□□□□□ -1.91
SMC4-225ENST00000497203 A0A1W2PNV4 684 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 ZSCAN5BA6NJL1 495 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 CCT8L1PA6NM43 557 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 A8MX80 341 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 FAM220BPB1ANY3 271 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 H0YCG3 227 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 SAP18O00422 153 aaKnown RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 XPO1O14980 1071 aaKnown RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 STX7O15400 261 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 332.3 ms