RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 C17orf67Q0P5P2 114 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 DUSP5Q16690 384 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 AGKQ53H12 422 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 FNDC7Q5VTL7 733 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 ENPP6Q6UWR7 440 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 CPLX4Q7Z7G2 160 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 IFNEQ86WN2 208 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 ZNF527Q8NB42 609 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 FAM83FQ8NEG4 500 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-209ENST00000496189 OR9I1Q8NGQ6 314 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 GOT1L1Q8NHS2 421 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-209ENST00000496189 HOXB13Q92826 284 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-209ENST00000496189 C16orf58Q96GQ5 468 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 PNPLA3Q9NST1 481 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 EXD2Q9NVH0 621 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 NINQ8N4C6 2090 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 USP9XQ93008 2570 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-209ENST00000496189 GMNCA6NCL1 334 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 H3BNH8 94 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 NDUFB5O43674 189 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 FADS1O60427 444 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 ANP32DO95626 131 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 ACTL6AO96019 429 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 AK1P00568 194 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 SRD5A2P31213 254 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 MAP3K8P41279 467 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 DSCR4P56555 118 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-209ENST00000496189 GNGT1P63211 74 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 STX5Q13190 355 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 RCAN2Q14206 197 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 GANABQ14697 944 aaKnown RBP14.92□□□□□ -0.02
SF3A1-209ENST00000496189 TIGD2Q4W5G0 525 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 WIPI1Q5MNZ9 446 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-209ENST00000496189 ATAD3BQ5T9A4 648 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 CGB2Q6NT52 195 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 AAGABQ6PD74 315 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 FIGNL1Q6PIW4 674 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 BLOC1S3Q6QNY0 202 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 B3GNT6Q6ZMB0 384 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 ZNF621Q6ZSS3 439 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 C6orf120Q7Z4R8 191 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 MISPQ8IVT2 679 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 WDSUB1Q8N9V3 476 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 ASB5Q8WWX0 329 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 RND1Q92730 232 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 CDS1Q92903 461 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 ABTB1Q969K4 478 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-209ENST00000496189 SPDL1Q96EA4 605 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 HOXD1Q9GZZ0 328 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 UBQLN4Q9NRR5 601 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 TAS2R10Q9NYW0 307 aa14.92□□□□□ -0.02
SF3A1-209ENST00000496189 DOPEY2Q9Y3R5 2298 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 NR5A2O00482 541 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 ANGPTL1O95841 491 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 NGFRP08138 427 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 RNF224P0DH78 156 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 MATN1P21941 496 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 DPP4P27487 766 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 GYS2P54840 703 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 TXNL4AP83876 142 aaKnown RBP14.91□□□□□ -0.02
SF3A1-209ENST00000496189 SF3A3Q12874 501 aaKnown RBP eCLIP14.91□□□□□ -0.02
SF3A1-209ENST00000496189 GRAMD1BQ3KR37 738 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 EIPR1Q53HC9 387 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 C6orf10Q5SRN2 563 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 DCST2Q5T1A1 773 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 OR5M10Q6IEU7 315 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 C16orf62Q7Z3J2 963 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 GALNT10Q86SR1 603 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 YRDCQ86U90 279 aaKnown RBP14.91□□□□□ -0.02
SF3A1-209ENST00000496189 OR10Q1Q8NGQ4 319 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 CA5BP1Q8WTZ4 195 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 RNF138Q8WVD3 245 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 ITLN2Q8WWU7 325 aaPredicted RBP14.91□□□□□ -0.02
SF3A1-209ENST00000496189 OTUB1Q96FW1 271 aaPredicted RBP14.91□□□□□ -0.02
SF3A1-209ENST00000496189 SLC35A5Q9BS91 424 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 OR2B2Q9GZK3 357 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 GPATCH2Q9NW75 528 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 SPRR3Q9UBC9 169 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 TNFRSF10DQ9UBN6 386 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 CAMK2AQ9UQM7 478 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 SLC6A5Q9Y345 797 aa14.91□□□□□ -0.02
SF3A1-209ENST00000496189 MRPS18CQ9Y3D5 142 aaKnown RBP14.91□□□□□ -0.02
SF3A1-209ENST00000496189 GTF3C1Q12789 2109 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 AHRRA9YTQ3 701 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 KRT75O95678 551 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 OXSR1O95747 527 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-209ENST00000496189 TBXA2RP21731 343 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 KHKP50053 298 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 SEC24CP53992 1094 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 HPCAP84074 193 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 ART3Q13508 389 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 FLYWCH1Q4VC44 716 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 NHSL2Q5HYW2 709 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 C1orf185Q5T7R7 199 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 SPATA21Q7Z572 469 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 MARCH3Q86UD3 253 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 FUNDC1Q8IVP5 155 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 FAM110BQ8TC76 370 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 DUSP19Q8WTR2 217 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 TSPEARQ8WU66 669 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms