RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ABCA2Q9BZC7 2435 aa10.08□□□□□ -0.8
TMEM39A-211ENST00000491685 UPK1AO00322 258 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 TP53I11O14683 189 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 HCN1O60741 890 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 WDR1O75083 606 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 KRT75O95678 551 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 AGR2O95994 175 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 ALOX5P09917 674 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 GABRA1P14867 456 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 S1PR1P21453 382 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 SOAT1P35610 550 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 CHI3L1P36222 383 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 MC3RP41968 323 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 KCNJ2P63252 427 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 MRPS35P82673 323 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 SF3A3Q12874 501 aaKnown RBP eCLIP10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 EXOSC7Q15024 291 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 LTB4RQ15722 352 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 PRSS53Q2L4Q9 553 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 MMEL1Q495T6 779 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 CYP27C1Q4G0S4 372 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 WLSQ5T9L3 541 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 SLC22A10Q63ZE4 541 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 B3GNT6Q6ZMB0 384 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 NAXEQ8NCW5 288 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 OR7G2Q8NG99 324 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 OR10Q1Q8NGQ4 319 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 ADAMTS15Q8TE58 950 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 SPDL1Q96EA4 605 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 MARK4Q96L34 752 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 JSRP1Q96MG2 331 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 LDAHQ9H6V9 325 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 EXO5Q9H790 373 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 Q9N2J8 555 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 ZFP64Q9NPA5 681 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 QPCTLQ9NXS2 382 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 CNIH4Q9P003 139 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 ACAD8Q9UKU7 415 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 EDARQ9UNE0 448 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 L3MBTL1Q9Y468 752 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 NPFFR2Q9Y5X5 522 aa10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 ANKHD1Q8IWZ3 2542 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-211ENST00000491685 ZNF469Q96JG9 3925 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 DOCK7Q96N67 2140 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 A0A1W2PP18 115 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ANGPT2O15123 496 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 SUSD5O60279 629 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 HNRNPCL1O60812 293 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ABCB7O75027 752 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ERN1O75460 977 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 KCNH1O95259 989 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 CBX7O95931 251 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 CD1EP15812 388 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 HOXB4P17483 251 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 MATN1P21941 496 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 GABRA3P34903 492 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 GCKP35557 465 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 MAGEA8P43361 318 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ZFP36L2P47974 494 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 CLK3P49761 638 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 EMDP50402 254 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 DGKQP52824 942 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 FBXW4P57775 412 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 HBA1P69905 142 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 DUSP2Q05923 314 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 DUSP8Q13202 625 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 SLC10A1Q14973 349 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 NTRK2Q16620 822 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 C6orf10Q5SRN2 563 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 DESI1Q6ICB0 168 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 NUP54Q7Z3B4 507 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 C6orf120Q7Z4R8 191 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 YTHDF3Q7Z739 585 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 TMEM200AQ86VY9 491 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ANKRD46Q86W74 232 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 PRR22Q8IZ63 422 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 PCYOX1LQ8NBM8 494 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 RELL2Q8NC24 303 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 PSMA8Q8TAA3 256 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 SFXN5Q8TD22 340 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 SLC9A6Q92581 669 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ADIPOR1Q96A54 375 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 TMCO6Q96DC7 493 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 TEX37Q96LM6 180 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 CCDC115Q96NT0 180 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 LRRC37BQ96QE4 947 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ZNF559Q9BR84 538 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ACTRT3Q9BYD9 372 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 RAD21L1Q9H4I0 556 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 HHATLQ9HCP6 504 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 EXD2Q9NVH0 621 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 GIN1Q9NXP7 522 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 ALKBH4Q9NXW9 302 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 NTMQ9P121 344 aa10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 LEF1Q9UJU2 399 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 GPR55Q9Y2T6 319 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-211ENST00000491685 MED12Q93074 2177 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms